C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: muscle glycogen phosphorylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032648 Pygm 10090 + 19:6384399-6398459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035269 Pygm-001 6384399-6398459 protein_coding
  ENSMUST00000113483 Pygm-004 6384415-6398448 protein_coding
  ENSMUST00000139775 Pygm-002 6397495-6398291 retained_intron
  ENSMUST00000142755 Pygm-003 6392711-6394184 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035269ENSMUST00000113483ENSMUST00000139775ENSMUST00000142755
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035269 8.758±4.95 25.698±2.88 17.287±2.24 3.985±4.65 231.049±150.34 4.672±1.47 358.335±32.29 10.431±5.47 0.578±0.31 35.423±21.66 2753.109±131.54 8.132±1.43 0.778±0.43 1.008±0.46
ENSMUST00000113483 0.820±0.00 12.890±3.63 N/A 0.091±0.00 86.118±7.87 1.981±0.74 43.067±0.00 1.899±0.00 0.388±0.17 2.447±0.58 N/A 1.775±0.00 0.167±0.01 0.431±0.00
ENSMUST00000139775 N/A N/A N/A 17.551±0.00 N/A N/A N/A N/A 0.855±0.09 N/A N/A 9.861±0.00 1.619±0.20 4.611±0.00
ENSMUST00000142755 N/A N/A N/A 10.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.596±0.00 7.830±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YW CIL_0001YW_0002 CGP 19:6363690-6398459

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005980 IDA glycogen catabolic process
GO:0008184 IDA glycogen phosphorylase activity
GO:0030170 IEA pyridoxal phosphate binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013317 pygmb phosphorylase, glycogen (muscle) b protein_coding Danio_rerio
ENSDARG00000055518 pygma phosphorylase, glycogen (muscle) A protein_coding Danio_rerio
ENSG00000068976 PYGM phosphorylase, glycogen, muscle protein_coding Homo_sapiens

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