C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase, glycogen, muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000164139 PYGM-001 ENSG00000068976 9606 - 11:64746389-64760297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000164139
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000164139 0.811±0.00 4.546±0.00 5.484±3.02 24.916±24.29 3.123±1.72 12.651±2.95 0.091±0.07 5.069±0.00 0.952±0.00 261.034±71.77 1.705±1.82 1.098±0.17 7.348±4.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005J1 CIL_0005J1_0002 CGP 11:64726911-64760297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004645 IEA phosphorylase activity
GO:0005829 TAS cytosol
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0005977 TAS glycogen metabolic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0008184 IEA glycogen phosphorylase activity
GO:0030170 IEA pyridoxal phosphate binding
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035269 Pygm-001 protein_coding Mus_musculus 0 3271
ENSMUST00000113483 Pygm-004 protein_coding Mus_musculus 0 2682
ENSMUST00000045441 Pygb-001 protein_coding Mus_musculus 0 1738
ENSMUST00000139775 Pygm-002 retained_intron Mus_musculus 0 551
ENSMUST00000129610 Pygb-004 retained_intron Mus_musculus 0 372
ENSMUST00000154366 Pygb-003 retained_intron Mus_musculus 0 246

Loading