C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oxysterol binding protein-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070882 OSBPL3 9606 - 7:24796539-24981634 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313367 OSBPL3-001 24796539-24980188 protein_coding
  ENST00000396429 OSBPL3-003 24800135-24892575 protein_coding
  ENST00000396431 OSBPL3-002 24799925-24892612 protein_coding
  ENST00000409069 OSBPL3-006 24800135-24892575 protein_coding
  ENST00000409452 OSBPL3-005 24800005-24892575 nonsense_mediated_decay
  ENST00000409555 OSBPL3-008 24800060-24892575 nonsense_mediated_decay
  ENST00000409759 OSBPL3-007 24800022-24892575 nonsense_mediated_decay
  ENST00000409863 OSBPL3-004 24799766-24892575 nonsense_mediated_decay
  ENST00000415162 OSBPL3-009 24870775-24918093 protein_coding
  ENST00000415952 OSBPL3-015 24871983-24981634 protein_coding
  ENST00000441059 OSBPL3-010 24871742-24918080 protein_coding
  ENST00000459987 OSBPL3-011 24806820-24810359 retained_intron
  ENST00000461835 OSBPL3-013 24842376-24849336 retained_intron
  ENST00000487020 OSBPL3-014 24800029-24815093 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313367ENST00000396429ENST00000396431ENST00000409069ENST00000409452ENST00000409555ENST00000409863ENST00000415162ENST00000441059
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313367 0.443±0.00 N/A 0.758±0.59 0.477±0.25 0.266±0.02 0.229±0.00 2.638±2.49 N/A 1.143±0.15 0.710±0.31 2.236±0.42 0.731±0.00 1.138±0.00
ENST00000396429 N/A 1.560±0.00 1.388±0.71 N/A 0.524±0.38 0.272±0.00 N/A 0.072±0.00 N/A N/A N/A N/A 0.412±0.00
ENST00000396431 N/A N/A 1.135±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409069 N/A N/A N/A N/A 0.658±0.00 0.234±0.00 0.251±0.00 0.760±0.00 2.142±0.00 1.759±0.00 4.699±1.73 1.289±0.00 1.407±0.00
ENST00000409452 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.546±0.00 N/A N/A 0.542±0.00
ENST00000409555 N/A N/A N/A 1.719±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409863 N/A N/A N/A N/A 0.641±0.00 N/A N/A N/A 0.766±0.00 N/A 2.397±0.00 N/A N/A
ENST00000415162 N/A N/A N/A N/A N/A N/A N/A 1.704±0.00 N/A N/A N/A N/A N/A
ENST00000441059 N/A N/A N/A N/A N/A 1.486±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CS CIL_0002CS_0001 CGP 7:24698353-24981634
CIL_0002CR CIL_0002CR_0001 CGP 7:24796539-25125361

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006869 IEA lipid transport
GO:0015485 IDA cholesterol binding
GO:0016020 IDA membrane
GO:0031965 IDA nuclear membrane
GO:0097038 IDA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033251 osbpl3a oxysterol binding protein-like 3a protein_coding Danio_rerio
ENSDARG00000040482 OSBPL3 (2 of 2) oxysterol binding protein-like 3 protein_coding Danio_rerio
ENSMUSG00000029822 Osbpl3 oxysterol binding protein-like 3 protein_coding Mus_musculus

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