C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313367 OSBPL3-001 ENSG00000070882 9606 - 7:24796539-24980188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000313367
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000313367 0.443±0.00 0.758±0.59 0.477±0.25 0.266±0.02 0.229±0.00 2.638±2.49 1.143±0.15 0.710±0.31 2.236±0.42 0.731±0.00 1.138±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CS CIL_0002CS_0001 CGP 7:24698353-24981634
CIL_0002CR CIL_0002CR_0001 CGP 7:24796539-25125361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006869 IEA lipid transport
GO:0015485 IDA cholesterol binding
GO:0016020 IDA membrane
GO:0031965 IDA nuclear membrane
GO:0097038 IDA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090019 Osbpl3-007 protein_coding Mus_musculus 0 2887
ENSMUST00000114468 Osbpl3-003 protein_coding Mus_musculus 0 2276
ENSMUST00000071728 Osbpl3-001 protein_coding Mus_musculus 0 1613
ENSMUST00000114466 Osbpl3-008 protein_coding Mus_musculus 0 1430
ENSMUST00000133141 Osbpl3-002 retained_intron Mus_musculus 0 1249
ENSMUST00000141466 Osbpl3-004 retained_intron Mus_musculus 0 603
ENSMUST00000146341 Osbpl3-009 protein_coding Mus_musculus 0 556
ENSMUST00000136926 Osbpl3-006 processed_transcript Mus_musculus 0 331
ENSMUST00000147621 Osbpl3-010 processed_transcript Mus_musculus 3.00004e-41 176

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