C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oxysterol binding protein-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029822 Osbpl3 10090 - 6:50293330-50456201 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071728 Osbpl3-001 50296799-50456170 protein_coding
  ENSMUST00000090019 Osbpl3-007 50297065-50370215 protein_coding
  ENSMUST00000114466 Osbpl3-008 50297065-50370215 protein_coding
  ENSMUST00000114468 Osbpl3-003 50293330-50382837 protein_coding
  ENSMUST00000133141 Osbpl3-002 50300214-50382837 retained_intron
  ENSMUST00000136926 Osbpl3-006 50352820-50397152 processed_transcript
  ENSMUST00000141466 Osbpl3-004 50295183-50300354 retained_intron
  ENSMUST00000146341 Osbpl3-009 50348085-50456161 protein_coding
  ENSMUST00000147621 Osbpl3-010 50327412-50456145 processed_transcript
  ENSMUST00000154333 Osbpl3-005 50411569-50456201 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071728ENSMUST00000090019ENSMUST00000114466ENSMUST00000114468ENSMUST00000133141ENSMUST00000141466ENSMUST00000147621ENSMUST00000154333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071728 1.902±1.53 3.030±0.37 9.977±2.40 0.606±0.18 1.237±0.35 3.059±0.90 1.676±0.04 4.044±0.35 0.340±0.08 1.594±0.71 0.168±0.11 1.642±0.54 4.314±1.14 0.151±0.06
ENSMUST00000090019 0.249±0.00 2.459±0.49 6.196±0.00 5.366±0.00 1.229±0.00 2.962±0.40 3.100±0.40 6.039±1.64 0.036±0.00 1.147±0.00 0.160±0.01 2.079±1.77 2.253±0.39 0.071±0.01
ENSMUST00000114466 0.316±0.00 3.634±1.12 N/A N/A N/A N/A N/A 3.582±0.00 0.118±0.06 N/A 0.232±0.14 1.608±0.60 3.348±0.00 0.137±0.06
ENSMUST00000114468 0.997±0.00 2.622±0.09 5.185±1.89 0.317±0.00 0.607±0.12 1.202±0.39 N/A 4.003±1.52 0.044±0.01 1.435±0.37 N/A 1.023±0.40 0.531±0.06 0.009±0.00
ENSMUST00000133141 N/A 1.550±0.00 N/A N/A 0.639±0.00 N/A N/A N/A 0.105±0.00 N/A 0.096±0.04 0.949±0.00 1.040±0.00 0.069±0.00
ENSMUST00000141466 N/A N/A N/A 1.253±0.00 N/A N/A N/A N/A 0.099±0.09 N/A 0.139±0.08 N/A N/A 0.038±0.00
ENSMUST00000147621 N/A 10.370±0.00 N/A N/A N/A 4.361±0.00 N/A N/A 0.176±0.00 N/A N/A 3.019±0.00 N/A N/A
ENSMUST00000154333 N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.06 N/A N/A 1.897±0.00 N/A 0.239±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CS CIL_0002CS_0002 CGP 6:50189369-50456201
CIL_0002CR CIL_0002CR_0002 CGP 6:50293330-50566538

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process
GO:0015485 IEA cholesterol binding
GO:0016020 IEA membrane
GO:0031965 IEA nuclear membrane
GO:0097038 IEA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033251 osbpl3a oxysterol binding protein-like 3a protein_coding Danio_rerio
ENSDARG00000040482 OSBPL3 (2 of 2) oxysterol binding protein-like 3 protein_coding Danio_rerio
ENSG00000070882 OSBPL3 oxysterol binding protein-like 3 protein_coding Homo_sapiens

Loading