C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409069 OSBPL3-006 ENSG00000070882 9606 - 7:24800135-24892575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409069
Transcript ID Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409069 0.658±0.00 0.234±0.00 0.251±0.00 0.760±0.00 2.142±0.00 1.759±0.00 4.699±1.73 1.289±0.00 1.407±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CS CIL_0002CS_0001 CGP 7:24698353-24981634
CIL_0002CR CIL_0002CR_0001 CGP 7:24796539-25125361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006869 IEA lipid transport
GO:0015485 IDA cholesterol binding
GO:0016020 IDA membrane
GO:0031965 IDA nuclear membrane
GO:0097038 IDA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071728 Osbpl3-001 protein_coding Mus_musculus 0 2619
ENSMUST00000114466 Osbpl3-008 protein_coding Mus_musculus 0 1712
ENSMUST00000133141 Osbpl3-002 retained_intron Mus_musculus 0 1439
ENSMUST00000114468 Osbpl3-003 protein_coding Mus_musculus 0 1434
ENSMUST00000090019 Osbpl3-007 protein_coding Mus_musculus 0 1430
ENSMUST00000146341 Osbpl3-009 protein_coding Mus_musculus 0 547
ENSMUST00000136926 Osbpl3-006 processed_transcript Mus_musculus 0 324
ENSMUST00000147621 Osbpl3-010 processed_transcript Mus_musculus 9.99967e-42 176

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