C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IIIB
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000071909 MYO3B 9606 + 2:170178145-170655171 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317935 MYO3B-003 170178145-170654481 nonsense_mediated_decay
  ENST00000408978 MYO3B-004 170178145-170654481 protein_coding
  ENST00000409044 MYO3B-001 170178145-170654481 protein_coding
  ENST00000409940 MYO3B-002 170178145-170519978 retained_intron
  ENST00000438642 MYO3B-006 170178145-170651639 processed_transcript
  ENST00000442690 MYO3B-007 170199208-170382766 protein_coding
  ENST00000469359 MYO3B-008 170407730-170412425 processed_transcript
  ENST00000484338 MYO3B-005 170180149-170499808 protein_coding
  ENST00000602629 MYO3B-009 170199252-170655171 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000408978ENST00000409044ENST00000409940ENST00000438642ENST00000442690ENST00000484338ENST00000602629
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000408978 0.615±0.00 N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A 0.015±0.00 N/A 0.556±0.00
ENST00000409044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A
ENST00000409940 N/A 0.017±0.00 0.031±0.00 0.021±0.00 0.033±0.00 N/A 0.016±0.00 0.009±0.00 N/A 0.017±0.00 N/A N/A
ENST00000438642 N/A 0.063±0.00 0.040±0.00 N/A 0.032±0.00 N/A 0.041±0.00 0.019±0.00 0.032±0.00 0.058±0.00 0.012±0.00 0.460±0.09
ENST00000442690 N/A 0.130±0.00 N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A
ENST00000484338 0.948±0.00 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A
ENST00000602629 N/A 0.042±0.00 0.028±0.01 N/A 0.014±0.00 0.623±0.00 N/A 0.015±0.00 0.005±0.00 0.028±0.00 0.024±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VY CIL_0007VY_0001 VISTA 2:169713097-170314655
CIL_0004SH CIL_0004SH_0001 CGP 2:169827458-170655171
CIL_0004SG CIL_0004SG_0001 CGP 2:170178145-170718078

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 IEA microfilament motor activity
GO:0001750 IEA photoreceptor outer segment
GO:0001917 IEA photoreceptor inner segment
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0007601 IEA visual perception
GO:0016459 IEA myosin complex
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0018107 IEA peptidyl-threonine phosphorylation
GO:0032426 IEA stereocilium bundle tip
GO:0032433 IEA filopodium tip
GO:0046777 IEA protein autophosphorylation
GO:0050896 IEA response to stimulus
GO:0051491 IEA positive regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006892 myo3b myosin IIIB protein_coding Danio_rerio
ENSMUSG00000042064 Myo3b myosin IIIB protein_coding Mus_musculus

Loading