C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IIIB
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042064 Myo3b 10090 + 2:70039126-70429198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060208 Myo3b-201 70039126-70429195 protein_coding
  ENSMUST00000112241 Myo3b-001 70096298-70183267 protein_coding
  ENSMUST00000112243 Myo3b-002 70083074-70429198 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060208ENSMUST00000112241ENSMUST00000112243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060208 0.002±0.00 0.002±0.00 N/A 0.033±0.00 0.030±0.02 N/A 0.001±0.00 0.596±0.26 0.000±0.00 0.127±0.04 0.003±0.00 0.423±0.26 0.002±0.00 0.487±0.00
ENSMUST00000112241 N/A N/A 0.034±0.00 N/A 0.102±0.00 0.065±0.00 N/A N/A 0.004±0.00 0.117±0.01 N/A 0.568±0.19 0.019±0.00 N/A
ENSMUST00000112243 0.494±0.48 0.024±0.02 0.011±0.00 0.232±0.00 0.046±0.02 N/A 0.004±0.00 0.462±0.08 0.002±0.00 0.163±0.00 0.003±0.00 0.411±0.18 0.017±0.02 0.109±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VY CIL_0007VY_0002 VISTA 2:69698509-70299848
CIL_0004SH CIL_0004SH_0002 CGP 2:69897246-70429198
CIL_0004SG CIL_0004SG_0002 CGP 2:70039126-70477729

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 IDA microfilament motor activity
GO:0001750 IDA photoreceptor outer segment
GO:0001917 IDA photoreceptor inner segment
GO:0003779 IEA actin binding
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0007601 IEA visual perception
GO:0016459 IEA myosin complex
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 IDA peptidyl-threonine phosphorylation
GO:0032426 IDA stereocilium bundle tip
GO:0032433 IPI filopodium tip
GO:0046777 IDA protein autophosphorylation
GO:0050896 IEA response to stimulus
GO:0051491 IPI positive regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006892 myo3b myosin IIIB protein_coding Danio_rerio
ENSG00000071909 MYO3B myosin IIIB protein_coding Homo_sapiens

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