C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IIIB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000408978 MYO3B-004 ENSG00000071909 9606 + 2:170178145-170654481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverOvaryTestisENST00000408978
Transcript ID Bladder Liver Ovary Testis
ENST00000408978 0.615±0.00 0.139±0.00 0.015±0.00 0.556±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VY CIL_0007VY_0001 VISTA 2:169713097-170314655
CIL_0004SH CIL_0004SH_0001 CGP 2:169827458-170655171
CIL_0004SG CIL_0004SG_0001 CGP 2:170178145-170718078

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IEA microfilament motor activity
GO:0001750 IEA photoreceptor outer segment
GO:0001917 IEA photoreceptor inner segment
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0007601 IEA visual perception
GO:0016459 IEA myosin complex
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0018107 IEA peptidyl-threonine phosphorylation
GO:0032426 IEA stereocilium bundle tip
GO:0032433 IEA filopodium tip
GO:0046777 IEA protein autophosphorylation
GO:0050896 IEA response to stimulus
GO:0051491 IEA positive regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060208 Myo3b-201 protein_coding Mus_musculus 0 3685
ENSMUST00000112243 Myo3b-002 protein_coding Mus_musculus 0 3685
ENSMUST00000112241 Myo3b-001 protein_coding Mus_musculus 0 697
ENSDART00000010378 myo3b-201 protein_coding Danio_rerio 0 394
ENSMUST00000188981 RP23-426D21.1-001 unprocessed_pseudogene Mus_musculus 0 300

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