C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1, mu 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444449 AP1M1-004 ENSG00000072958 9606 + 19:16197934-16235345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444449 27.124±0.00 15.848±0.00 1.559±0.00 14.578±9.00 11.940±10.59 8.816±7.25 7.622±0.00 12.171±8.47 11.176±9.97 14.967±0.00 14.182±13.01 12.420±8.48 21.003±8.50 28.785±11.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IP CIL_0000IP_0001 CGP 19:16185380-16245907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IPI:IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030131 IEA clathrin adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032438 IMP melanosome organization
GO:0032588 TAS trans-Golgi network membrane
GO:0035646 IMP endosome to melanosome transport
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003117 Ap1m1-001 protein_coding Mus_musculus 0 909
ENSMUST00000126885 Ap1m1-005 protein_coding Mus_musculus 0 627
ENSMUST00000156735 Ap1m1-003 retained_intron Mus_musculus 0 603
ENSMUST00000151546 Ap1m1-002 retained_intron Mus_musculus 0 501
ENSMUST00000145213 Ap1m1-004 protein_coding Mus_musculus 0 442
ENSDART00000034505 ap1m2-001 protein_coding Danio_rerio 0 313
ENSMUST00000003397 Ap1m2-201 protein_coding Mus_musculus 0 303
ENSMUST00000115433 Ap1m2-202 protein_coding Mus_musculus 0 303
ENSDART00000125176 AP1M2 (1 of 2)-201 protein_coding Danio_rerio 0 279

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