C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1, mu 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000291439 AP1M1-001 ENSG00000072958 9606 + 19:16197578-16245907 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyLiverLungMuscleOvaryTestisENST00000291439
Transcript ID Bladder Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000291439 0.093±0.00 0.108±0.00 0.185±0.08 0.198±0.11 0.209±0.00 0.234±0.00 0.058±0.00 0.616±0.00 0.452±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IP CIL_0000IP_0001 CGP 19:16185380-16245907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IPI:IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030131 IEA clathrin adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032438 IMP melanosome organization
GO:0032588 TAS trans-Golgi network membrane
GO:0035646 IMP endosome to melanosome transport
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003117 Ap1m1-001 protein_coding Mus_musculus 0 1668
ENSDART00000034505 ap1m2-001 protein_coding Danio_rerio 0 743
ENSMUST00000126885 Ap1m1-005 protein_coding Mus_musculus 0 713
ENSDART00000125176 AP1M2 (1 of 2)-201 protein_coding Danio_rerio 0 710
ENSMUST00000003397 Ap1m2-201 protein_coding Mus_musculus 0 671
ENSMUST00000115433 Ap1m2-202 protein_coding Mus_musculus 0 649
ENSMUST00000156735 Ap1m1-003 retained_intron Mus_musculus 0 603
ENSMUST00000151546 Ap1m1-002 retained_intron Mus_musculus 0 501
ENSMUST00000145213 Ap1m1-004 protein_coding Mus_musculus 0 442
ENSMUST00000127700 Coq7-003 retained_intron Mus_musculus 0.0000004 64
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000001 62
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0009 53

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