C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium voltage-gated channel, KQT-like subfamily, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000075043 KCNQ2 9606 - 20:63406039-63472638 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344425 KCNQ2-006 63433679-63472638 protein_coding
  ENST00000344462 KCNQ2-012 63406466-63472509 protein_coding
  ENST00000357249 KCNQ2-001 63406039-63472638 protein_coding
  ENST00000359125 KCNQ2-003 63406189-63472638 protein_coding
  ENST00000360480 KCNQ2-011 63406446-63472638 protein_coding
  ENST00000370221 KCNQ2-009 63424024-63472638 retained_intron
  ENST00000370224 KCNQ2-007 63406447-63472638 protein_coding
  ENST00000482957 KCNQ2-010 63433678-63434730 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyOvaryPlacentaTestisENST00000344425ENST00000344462ENST00000359125ENST00000370221ENST00000370224ENST00000482957
Transcript ID Adrenal Brain Colon Heart Kidney Ovary Placenta Testis
ENST00000344425 0.140±0.00 6.487±0.00 N/A 0.165±0.00 N/A 0.163±0.00 0.069±0.01 24.757±3.08
ENST00000344462 N/A N/A N/A N/A N/A 0.158±0.00 N/A N/A
ENST00000359125 N/A N/A 0.140±0.00 N/A 0.148±0.00 0.024±0.00 N/A N/A
ENST00000370221 N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A
ENST00000370224 N/A 1.442±0.00 N/A N/A N/A N/A N/A N/A
ENST00000482957 N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000X3 CIL_0000X3_0001 CGP 20:63343310-63472638
CIL_00045E CIL_00045E_0001 CGP 20:63406039-63499315

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005249 TAS voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005267 TAS potassium channel activity
GO:0005886 ISS plasma membrane
GO:0006811 IEA ion transport
GO:0006813 TAS potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0019226 IEA transmission of nerve impulse
GO:0030506 IPI ankyrin binding
GO:0033268 ISS node of Ranvier
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043194 ISS axon initial segment
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029916 KCNQ2 (1 of 3) potassium voltage-gated channel, KQT-like subfamily, member 2 protein_coding Danio_rerio
ENSDARG00000091130 KCNQ2 (3 of 3) potassium voltage-gated channel, KQT-like subfamily, member 2 protein_coding Danio_rerio
ENSMUSG00000016346 Kcnq2 potassium voltage-gated channel, subfamily Q, member 2 protein_coding Mus_musculus

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