C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium voltage-gated channel, subfamily Q, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016346 Kcnq2 10090 - 2:181075579-181135291 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016491 Kcnq2-001 181075588-181135291 protein_coding
  ENSMUST00000049792 Kcnq2-004 181075588-181135177 protein_coding
  ENSMUST00000081528 Kcnq2-003 181075588-181135177 protein_coding
  ENSMUST00000103047 Kcnq2-006 181075588-181135177 protein_coding
  ENSMUST00000103048 Kcnq2-005 181075588-181135177 protein_coding
  ENSMUST00000103049 Kcnq2-016 181080503-181134922 protein_coding
  ENSMUST00000103050 Kcnq2-018 181081030-181135103 protein_coding
  ENSMUST00000103051 Kcnq2-017 181079581-181135206 protein_coding
  ENSMUST00000123336 Kcnq2-011 181108444-181135177 protein_coding
  ENSMUST00000129073 Kcnq2-007 181085978-181135177 protein_coding
  ENSMUST00000129361 Kcnq2-012 181108444-181135177 protein_coding
  ENSMUST00000129695 Kcnq2-015 181080501-181114683 protein_coding
  ENSMUST00000139458 Kcnq2-009 181096466-181135177 protein_coding
  ENSMUST00000140789 Kcnq2-002 181108444-181135243 retained_intron
  ENSMUST00000144592 Kcnq2-008 181096241-181135177 protein_coding
  ENSMUST00000145861 Kcnq2-014 181084582-181100798 retained_intron
  ENSMUST00000149964 Kcnq2-013 181075579-181135103 protein_coding
  ENSMUST00000152099 Kcnq2-019 181086979-181095421 processed_transcript
  ENSMUST00000154164 Kcnq2-010 181108444-181135177 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016491ENSMUST00000081528ENSMUST00000103048ENSMUST00000103049ENSMUST00000103050ENSMUST00000103051ENSMUST00000123336ENSMUST00000129073ENSMUST00000129361ENSMUST00000129695ENSMUST00000139458ENSMUST00000140789ENSMUST00000144592ENSMUST00000145861ENSMUST00000149964ENSMUST00000152099ENSMUST00000154164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016491 N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A 0.058±0.03 N/A N/A
ENSMUST00000081528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A
ENSMUST00000103048 N/A N/A N/A N/A N/A N/A N/A 0.035±0.03 N/A 0.011±0.00 N/A N/A N/A N/A
ENSMUST00000103049 N/A N/A N/A N/A N/A 0.174±0.00 N/A 0.069±0.00 N/A N/A N/A N/A 0.005±0.00 1.918±1.03
ENSMUST00000103050 0.040±0.01 0.620±0.05 N/A N/A 0.027±0.00 N/A N/A 0.030±0.02 N/A 0.016±0.00 N/A 0.061±0.00 N/A 1.251±0.21
ENSMUST00000103051 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 0.025±0.00 N/A N/A N/A
ENSMUST00000123336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.04 N/A
ENSMUST00000129073 N/A N/A N/A N/A N/A 0.204±0.00 N/A 0.028±0.00 N/A N/A N/A 0.032±0.00 0.039±0.00 N/A
ENSMUST00000129361 N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000129695 0.014±0.00 N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.082±0.06 1.020±0.81
ENSMUST00000139458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A
ENSMUST00000140789 0.009±0.00 N/A 0.005±0.00 N/A 0.011±0.00 N/A N/A 0.014±0.00 0.007±0.00 0.016±0.00 N/A 0.028±0.02 0.005±0.00 N/A
ENSMUST00000144592 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145861 0.013±0.00 N/A N/A 11.436±0.00 0.014±0.00 N/A N/A 0.015±0.00 0.201±0.00 N/A 0.017±0.00 0.039±0.02 0.010±0.00 0.038±0.00
ENSMUST00000149964 0.012±0.01 0.751±0.00 0.014±0.00 14.776±6.97 0.007±0.00 0.215±0.02 N/A 0.022±0.02 0.009±0.00 0.007±0.00 0.015±0.01 0.013±0.01 0.011±0.01 0.277±0.16
ENSMUST00000152099 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 0.140±0.00 1.898±0.00
ENSMUST00000154164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 0.100±0.00 0.048±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000X3 CIL_0000X3_0002 CGP 2:181018380-181135291
CIL_00045E CIL_00045E_0002 CGP 2:181075579-181157014

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005886 IDA plasma membrane
GO:0008076 IEA voltage-gated potassium channel complex
GO:0019226 IMP transmission of nerve impulse
GO:0030506 IEA ankyrin binding
GO:0033268 IDA node of Ranvier
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043194 IDA axon initial segment
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029916 KCNQ2 (1 of 3) potassium voltage-gated channel, KQT-like subfamily, member 2 protein_coding Danio_rerio
ENSDARG00000091130 KCNQ2 (3 of 3) potassium voltage-gated channel, KQT-like subfamily, member 2 protein_coding Danio_rerio
ENSG00000075043 KCNQ2 potassium voltage-gated channel, KQT-like subfamily, member 2 protein_coding Homo_sapiens

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