C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00045E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000075043-ENSG00000101210 CGP 9606 20:63406039-63499315
GeneTranscriptPositionBiotype
ENSG00000075043 (KCNQ2)
potassium voltage-gated channel, KQT-like subfamily, member 2 		ENST00000344425 (KCNQ2-006) 63433679-63472638 protein_coding
ENST00000344462 (KCNQ2-012) 63406466-63472509 protein_coding
ENST00000357249 (KCNQ2-001) 63406039-63472638 protein_coding
ENST00000359125 (KCNQ2-003) 63406189-63472638 protein_coding
ENST00000360480 (KCNQ2-011) 63406446-63472638 protein_coding
ENST00000370221 (KCNQ2-009) 63424024-63472638 retained_intron
ENST00000370224 (KCNQ2-007) 63406447-63472638 protein_coding
ENST00000482957 (KCNQ2-010) 63433678-63434730 processed_transcript
ENSG00000101210 (EEF1A2)
eukaryotic translation elongation factor 1 alpha 2 		ENST00000217182 (EEF1A2-201) 63488013-63499315 protein_coding
ENST00000298049 (EEF1A2-001) 63488013-63497834 protein_coding
ENSG00000226390 (RP11-358D14.2)
 ENST00000436263 (RP11-358D14.2-001) 63448051-63449329 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00045E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016346-ENSMUSG00000016349 CGP 10090 2:181075579-181157014
GeneTranscriptPositionBiotype
ENSMUSG00000016346 (Kcnq2)
potassium voltage-gated channel, subfamily Q, member 2 		ENSMUST00000016491 (Kcnq2-001) 181075588-181135291 protein_coding
ENSMUST00000049792 (Kcnq2-004) 181075588-181135177 protein_coding
ENSMUST00000081528 (Kcnq2-003) 181075588-181135177 protein_coding
ENSMUST00000103047 (Kcnq2-006) 181075588-181135177 protein_coding
ENSMUST00000103048 (Kcnq2-005) 181075588-181135177 protein_coding
ENSMUST00000103049 (Kcnq2-016) 181080503-181134922 protein_coding
ENSMUST00000103050 (Kcnq2-018) 181081030-181135103 protein_coding
ENSMUST00000103051 (Kcnq2-017) 181079581-181135206 protein_coding
ENSMUST00000123336 (Kcnq2-011) 181108444-181135177 protein_coding
ENSMUST00000129073 (Kcnq2-007) 181085978-181135177 protein_coding
ENSMUST00000129361 (Kcnq2-012) 181108444-181135177 protein_coding
ENSMUST00000129695 (Kcnq2-015) 181080501-181114683 protein_coding
ENSMUST00000139458 (Kcnq2-009) 181096466-181135177 protein_coding
ENSMUST00000140789 (Kcnq2-002) 181108444-181135243 retained_intron
ENSMUST00000144592 (Kcnq2-008) 181096241-181135177 protein_coding
ENSMUST00000145861 (Kcnq2-014) 181084582-181100798 retained_intron
ENSMUST00000149964 (Kcnq2-013) 181075579-181135103 protein_coding
ENSMUST00000152099 (Kcnq2-019) 181086979-181095421 processed_transcript
ENSMUST00000154164 (Kcnq2-010) 181108444-181135177 protein_coding
ENSMUSG00000016349 (Eef1a2)
eukaryotic translation elongation factor 1 alpha 2 		ENSMUST00000055990 (Eef1a2-001) 181147653-181157014 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045E_0001ENSG00000075043ENST00000344425ENST00000344462ENST00000357249ENST00000359125ENST00000360480ENST00000370221ENST00000370224ENST00000482957ENSG00000101210ENST00000217182ENST00000298049ENSG00000226390ENST00000436263CIL_00045E_0002ENSMUSG00000016346ENSMUST00000016491ENSMUST00000049792ENSMUST00000081528ENSMUST00000103047ENSMUST00000103048ENSMUST00000103049ENSMUST00000103050ENSMUST00000103051ENSMUST00000123336ENSMUST00000129073ENSMUST00000129361ENSMUST00000129695ENSMUST00000139458ENSMUST00000140789ENSMUST00000144592ENSMUST00000145861ENSMUST00000149964ENSMUST00000152099ENSMUST00000154164ENSMUSG00000016349ENSMUST00000055990
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045E_0001ENSG00000075043ENST00000344425ENST00000344462ENST00000359125ENST00000370221ENST00000370224ENST00000482957ENSG00000101210ENST00000217182ENST00000298049ENSG00000226390ENST00000436263CIL_00045E_0002ENSMUSG00000016346ENSMUST00000016491ENSMUST00000081528ENSMUST00000103048ENSMUST00000103049ENSMUST00000103050ENSMUST00000103051ENSMUST00000123336ENSMUST00000129073ENSMUST00000129361ENSMUST00000129695ENSMUST00000139458ENSMUST00000140789ENSMUST00000144592ENSMUST00000145861ENSMUST00000149964ENSMUST00000152099ENSMUST00000154164ENSMUSG00000016349ENSMUST00000055990
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075043 ENST00000344425 N/A 0.140±0.00 N/A 6.487±0.00 N/A N/A 0.165±0.00 N/A N/A N/A N/A 0.163±0.00 0.069±0.01 24.757±3.08
ENST00000344462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.158±0.00 N/A N/A
ENST00000357249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000359125 N/A N/A N/A N/A N/A 0.140±0.00 N/A 0.148±0.00 N/A N/A N/A 0.024±0.00 N/A N/A
ENST00000360480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370221 N/A N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A
ENST00000370224 N/A N/A N/A 1.442±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482957 N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101210 ENST00000217182 N/A N/A N/A 55.325±0.00 N/A N/A N/A 1.031±0.00 N/A N/A N/A N/A N/A N/A
ENST00000298049 0.474±0.00 1.149±0.00 0.073±0.00 219.806±138.23 27.776±27.21 8.013±7.95 254.171±206.23 0.984±0.91 0.422±0.03 0.837±0.33 927.470±622.61 1.095±0.67 1.372±1.83 19.918±16.37
ENSG00000226390 ENST00000436263 N/A N/A N/A 0.235±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.760±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016346 ENSMUST00000016491 N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A 0.058±0.03 N/A N/A
ENSMUST00000049792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000081528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A
ENSMUST00000103047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000103048 N/A N/A N/A N/A N/A N/A N/A 0.035±0.03 N/A 0.011±0.00 N/A N/A N/A N/A
ENSMUST00000103049 N/A N/A N/A N/A N/A 0.174±0.00 N/A 0.069±0.00 N/A N/A N/A N/A 0.005±0.00 1.918±1.03
ENSMUST00000103050 0.040±0.01 0.620±0.05 N/A N/A 0.027±0.00 N/A N/A 0.030±0.02 N/A 0.016±0.00 N/A 0.061±0.00 N/A 1.251±0.21
ENSMUST00000103051 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 0.025±0.00 N/A N/A N/A
ENSMUST00000123336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.04 N/A
ENSMUST00000129073 N/A N/A N/A N/A N/A 0.204±0.00 N/A 0.028±0.00 N/A N/A N/A 0.032±0.00 0.039±0.00 N/A
ENSMUST00000129361 N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000129695 0.014±0.00 N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.082±0.06 1.020±0.81
ENSMUST00000139458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A
ENSMUST00000140789 0.009±0.00 N/A 0.005±0.00 N/A 0.011±0.00 N/A N/A 0.014±0.00 0.007±0.00 0.016±0.00 N/A 0.028±0.02 0.005±0.00 N/A
ENSMUST00000144592 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145861 0.013±0.00 N/A N/A 11.436±0.00 0.014±0.00 N/A N/A 0.015±0.00 0.201±0.00 N/A 0.017±0.00 0.039±0.02 0.010±0.00 0.038±0.00
ENSMUST00000149964 0.012±0.01 0.751±0.00 0.014±0.00 14.776±6.97 0.007±0.00 0.215±0.02 N/A 0.022±0.02 0.009±0.00 0.007±0.00 0.015±0.01 0.013±0.01 0.011±0.01 0.277±0.16
ENSMUST00000152099 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 0.140±0.00 1.898±0.00
ENSMUST00000154164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 0.100±0.00 0.048±0.01 N/A
ENSMUSG00000016349 ENSMUST00000055990 0.516±0.34 11.345±2.68 0.353±0.09 213.864±247.08 51.245±53.12 3.280±0.33 415.508±18.39 3.887±3.54 0.022±0.02 7.697±5.06 411.528±14.35 0.147±0.07 0.042±0.02 0.035±0.01

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