C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bone morphogenetic protein/retinoic acid inducible neural-specific 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000078725 BRINP1 9606 - 9:119153458-119369467 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265922 BRINP1-001 119166630-119369467 protein_coding
  ENST00000373964 BRINP1-002 119213620-119369425 protein_coding
  ENST00000482797 BRINP1-003 119153458-119208886 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265922ENST00000373964ENST00000482797
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265922 N/A 0.265±0.00 0.157±0.00 23.429±1.06 0.342±0.00 0.152±0.00 0.126±0.00 0.202±0.17 0.211±0.00 0.361±0.15 0.061±0.00 0.078±0.03 0.036±0.01 0.677±0.41
ENST00000373964 0.053±0.00 N/A 0.507±0.00 N/A N/A N/A 0.018±0.00 0.114±0.00 N/A N/A N/A N/A N/A N/A
ENST00000482797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FN CIL_0004FN_0001 CGP 9:117704332-119369467
CIL_0004FK CIL_0004FK_0001 CGP 9:119153458-120580170

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007050 IEA cell cycle arrest
GO:0008219 IDA cell death
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045786 IDA negative regulation of cell cycle
GO:0045930 IEA negative regulation of mitotic cell cycle
GO:0071300 IEA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078302 BRINP1 bone morphogenetic protein/retinoic acid inducible neural-specific 1 protein_coding Danio_rerio
ENSMUSG00000028351 Brinp1 bone morphogenic protein/retinoic acid inducible neural specific 1 protein_coding Mus_musculus

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