C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bone morphogenic protein/retinoic acid inducible neural specific 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028351 Brinp1 10090 - 4:68761514-68954397 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030036 Brinp1-001 68761514-68954397 protein_coding
  ENSMUST00000140572 Brinp1-003 68826581-68829358 processed_transcript
  ENSMUST00000156773 Brinp1-002 68795954-68841407 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030036ENSMUST00000140572ENSMUST00000156773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030036 0.114±0.03 0.305±0.06 0.422±0.07 23.773±20.67 0.095±0.05 0.033±0.01 0.068±0.04 0.099±0.04 0.147±0.06 0.575±0.23 0.018±0.00 0.142±0.06 0.096±0.06 0.128±0.03
ENSMUST00000140572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.224±0.00
ENSMUST00000156773 N/A N/A N/A N/A N/A 0.041±0.03 N/A N/A N/A N/A N/A N/A 0.014±0.00 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FN CIL_0004FN_0002 CGP 4:66827584-68954397
CIL_0004FK CIL_0004FK_0002 CGP 4:68761514-70410443

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005737 ISS cytoplasm
GO:0007050 IEA cell cycle arrest
GO:0008219 ISS cell death
GO:0045666 IDA positive regulation of neuron differentiation
GO:0045786 ISS negative regulation of cell cycle
GO:0045930 IDA negative regulation of mitotic cell cycle
GO:0071300 IDA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078302 BRINP1 bone morphogenetic protein/retinoic acid inducible neural-specific 1 protein_coding Danio_rerio
ENSG00000078725 BRINP1 bone morphogenetic protein/retinoic acid inducible neural-specific 1 protein_coding Homo_sapiens

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