C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein/retinoic acid inducible neural-specific 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265922 BRINP1-001 ENSG00000078725 9606 - 9:119166630-119369467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265922
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265922 0.265±0.00 0.157±0.00 23.429±1.06 0.342±0.00 0.152±0.00 0.126±0.00 0.202±0.17 0.211±0.00 0.361±0.15 0.061±0.00 0.078±0.03 0.036±0.01 0.677±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FN CIL_0004FN_0001 CGP 9:117704332-119369467
CIL_0004FK CIL_0004FK_0001 CGP 9:119153458-120580170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007050 IEA cell cycle arrest
GO:0008219 IDA cell death
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045786 IDA negative regulation of cell cycle
GO:0045930 IEA negative regulation of mitotic cell cycle
GO:0071300 IEA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030036 Brinp1-001 protein_coding Mus_musculus 0 3834
ENSDART00000108804 BRINP1-201 protein_coding Danio_rerio 0 1354
ENSMUST00000156773 Brinp1-002 processed_transcript Mus_musculus 0 1040
ENSMUST00000140572 Brinp1-003 processed_transcript Mus_musculus 0 296

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