C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-X-C motif) ligand 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000081041 CXCL2 9606 - 4:74097035-74099293 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296031 CXCL2-003 74097676-74099195 processed_transcript
  ENST00000508487 CXCL2-001 74097035-74099293 protein_coding
  ENST00000510048 CXCL2-002 74098531-74099196 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296031ENST00000508487ENST00000510048
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296031 N/A N/A N/A N/A N/A 1.799±0.00 N/A N/A 21.103±0.00 N/A N/A N/A N/A
ENST00000508487 0.775±0.00 0.506±0.00 0.609±0.09 2.450±1.38 0.552±0.41 0.936±0.00 27.160±0.00 18.817±15.30 8.909±6.47 1.152±0.47 7.483±4.60 0.750±0.62 1.237±0.92
ENST00000510048 0.613±0.00 N/A N/A N/A N/A N/A N/A N/A 4.728±0.00 N/A N/A 0.125±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035G CIL_00035G_0001 CGP 4:74036589-74099293
CIL_00035M CIL_00035M_0001 CGP 4:74097035-74303099

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002237 IDA response to molecule of bacterial origin
GO:0005515 IPI protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005615 IEA extracellular space
GO:0006935 TAS chemotaxis
GO:0006954 IEA inflammatory response
GO:0006955 IEA immune response
GO:0008009 IEA chemokine activity
GO:0060326 IEA cell chemotaxis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000029379 Cxcl3 chemokine (C-X-C motif) ligand 3 protein_coding Mus_musculus
ENSMUSG00000029380 Cxcl1 chemokine (C-X-C motif) ligand 1 protein_coding Mus_musculus
ENSMUSG00000058427 Cxcl2 chemokine (C-X-C motif) ligand 2 protein_coding Mus_musculus

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