C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-X-C motif) ligand 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508487 CXCL2-001 ENSG00000081041 9606 - 4:74097035-74099293 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000508487
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000508487 0.775±0.00 0.506±0.00 0.609±0.09 2.450±1.38 0.552±0.41 0.936±0.00 27.160±0.00 18.817±15.30 8.909±6.47 1.152±0.47 7.483±4.60 0.750±0.62 1.237±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035G CIL_00035G_0001 CGP 4:74036589-74099293
CIL_00035M CIL_00035M_0001 CGP 4:74097035-74303099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002237 IDA response to molecule of bacterial origin
GO:0005515 IPI protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005615 IEA extracellular space
GO:0006935 TAS chemotaxis
GO:0006954 IEA inflammatory response
GO:0006955 IEA immune response
GO:0008009 IEA chemokine activity
GO:0060326 IEA cell chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031327 Cxcl1-001 protein_coding Mus_musculus 1.00053e-42 178

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