C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PEST proteolytic signal containing nuclear protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000081154 PCNP 9606 + 3:101574095-101594437 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265260 PCNP-001 101574095-101594437 protein_coding
  ENST00000460231 PCNP-002 101574190-101594407 nonsense_mediated_decay
  ENST00000465366 PCNP-009 101589749-101592875 retained_intron
  ENST00000469941 PCNP-003 101574194-101594437 protein_coding
  ENST00000470490 PCNP-007 101574841-101592776 processed_transcript
  ENST00000486406 PCNP-006 101574219-101593251 processed_transcript
  ENST00000498274 PCNP-005 101574186-101592771 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265260ENST00000460231ENST00000469941ENST00000470490ENST00000498274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265260 17.173±0.00 21.069±0.00 1.651±0.00 14.022±11.65 10.247±6.00 19.953±17.94 8.743±6.44 13.349±11.70 6.413±0.76 12.642±8.56 6.068±5.18 12.309±9.36 10.296±2.05 14.901±8.89
ENST00000460231 13.936±0.00 12.684±0.00 2.694±0.00 14.675±6.83 8.879±1.95 9.832±2.17 9.078±4.97 4.470±3.13 6.709±2.99 17.343±11.41 9.770±7.79 11.367±5.20 9.063±0.75 7.418±0.09
ENST00000469941 N/A N/A N/A 7.070±0.00 N/A N/A N/A 2.945±1.78 N/A N/A N/A 9.450±0.00 N/A 4.494±0.14
ENST00000470490 N/A N/A 6.010±0.00 5.944±0.00 N/A N/A N/A N/A 7.969±0.00 N/A 4.626±0.00 N/A N/A N/A
ENST00000498274 N/A N/A 2.469±0.00 N/A N/A 4.310±0.00 N/A N/A N/A 4.820±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007049 IEA cell cycle
GO:0016567 IDA protein ubiquitination
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037713 pcnp PEST proteolytic signal containing nuclear protein protein_coding Danio_rerio
ENSMUSG00000071533 Pcnp PEST proteolytic signal containing nuclear protein protein_coding Mus_musculus

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