C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PEST proteolytic signal containing nuclear protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071533 Pcnp 10090 - 16:56007245-56029739 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096021 Pcnp-003 56017191-56024668 protein_coding
  ENSMUST00000114444 Pcnp-001 56015506-56029739 protein_coding
  ENSMUST00000119981 Pcnp-008 56007245-56024628 protein_coding
  ENSMUST00000122253 Pcnp-005 56018120-56029696 protein_coding
  ENSMUST00000125040 Pcnp-007 56015506-56029696 nonsense_mediated_decay
  ENSMUST00000130818 Pcnp-002 56016999-56029676 nonsense_mediated_decay
  ENSMUST00000137736 Pcnp-004 56016800-56029686 processed_transcript
  ENSMUST00000140227 Pcnp-006 56017032-56029706 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114444ENSMUST00000122253ENSMUST00000125040
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114444 10.304±0.00 22.866±1.52 15.792±0.03 5.450±0.00 9.197±0.00 4.463±0.00 9.623±0.00 22.808±12.80 N/A 9.567±0.32 7.472±0.00 14.497±10.62 N/A
ENSMUST00000122253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.132±0.00
ENSMUST00000125040 13.290±2.20 21.068±0.89 16.523±2.61 9.826±1.37 N/A 10.023±1.84 14.508±3.91 8.306±1.41 18.431±4.43 14.767±2.60 15.793±12.49 14.197±7.90 6.232±3.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0007049 IEA cell cycle
GO:0016567 IEA protein ubiquitination
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037713 pcnp PEST proteolytic signal containing nuclear protein protein_coding Danio_rerio
ENSG00000081154 PCNP PEST proteolytic signal containing nuclear protein protein_coding Homo_sapiens

Loading