C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PEST proteolytic signal containing nuclear protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469941 PCNP-003 ENSG00000081154 9606 + 3:101574194-101594437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyOvaryTestisENST00000469941
Transcript ID Brain Kidney Ovary Testis
ENST00000469941 7.070±0.00 2.945±1.78 9.450±0.00 4.494±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007049 IEA cell cycle
GO:0016567 IDA protein ubiquitination
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114444 Pcnp-001 protein_coding Mus_musculus 0 861
ENSMUST00000125040 Pcnp-007 nonsense_mediated_decay Mus_musculus 0 861
ENSMUST00000137736 Pcnp-004 processed_transcript Mus_musculus 0 601
ENSMUST00000130818 Pcnp-002 nonsense_mediated_decay Mus_musculus 0 484
ENSMUST00000056948 Gm7887-201 processed_pseudogene Mus_musculus 0 479
ENSMUST00000119981 Pcnp-008 protein_coding Mus_musculus 0 390
ENSMUST00000096021 Pcnp-003 protein_coding Mus_musculus 0 388
ENSMUST00000140227 Pcnp-006 processed_transcript Mus_musculus 0 374
ENSMUST00000122253 Pcnp-005 protein_coding Mus_musculus 0 200

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