C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PEST proteolytic signal containing nuclear protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265260 PCNP-001 ENSG00000081154 9606 + 3:101574095-101594437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265260
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265260 17.173±0.00 21.069±0.00 1.651±0.00 14.022±11.65 10.247±6.00 19.953±17.94 8.743±6.44 13.349±11.70 6.413±0.76 12.642±8.56 6.068±5.18 12.309±9.36 10.296±2.05 14.901±8.89

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007049 IEA cell cycle
GO:0016567 IDA protein ubiquitination
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114444 Pcnp-001 protein_coding Mus_musculus 0 961
ENSMUST00000056948 Gm7887-201 processed_pseudogene Mus_musculus 0 905
ENSMUST00000125040 Pcnp-007 nonsense_mediated_decay Mus_musculus 0 861
ENSMUST00000130818 Pcnp-002 nonsense_mediated_decay Mus_musculus 0 808
ENSMUST00000096021 Pcnp-003 protein_coding Mus_musculus 0 713
ENSMUST00000119981 Pcnp-008 protein_coding Mus_musculus 0 713
ENSMUST00000122253 Pcnp-005 protein_coding Mus_musculus 0 645
ENSMUST00000137736 Pcnp-004 processed_transcript Mus_musculus 0 484
ENSMUST00000140227 Pcnp-006 processed_transcript Mus_musculus 0 374

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