C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PEST proteolytic signal containing nuclear protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460231 PCNP-002 ENSG00000081154 9606 + 3:101574190-101594407 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000460231
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000460231 13.936±0.00 12.684±0.00 2.694±0.00 14.675±6.83 8.879±1.95 9.832±2.17 9.078±4.97 4.470±3.13 6.709±2.99 17.343±11.41 9.770±7.79 11.367±5.20 9.063±0.75 7.418±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114444 Pcnp-001 protein_coding Mus_musculus 0 832
ENSMUST00000125040 Pcnp-007 nonsense_mediated_decay Mus_musculus 0 832
ENSMUST00000130818 Pcnp-002 nonsense_mediated_decay Mus_musculus 0 712
ENSMUST00000056948 Gm7887-201 processed_pseudogene Mus_musculus 0 706
ENSMUST00000119981 Pcnp-008 protein_coding Mus_musculus 0 617
ENSMUST00000096021 Pcnp-003 protein_coding Mus_musculus 0 616
ENSMUST00000137736 Pcnp-004 processed_transcript Mus_musculus 0 484
ENSMUST00000122253 Pcnp-005 protein_coding Mus_musculus 0 427
ENSMUST00000140227 Pcnp-006 processed_transcript Mus_musculus 0 374

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