C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ras-related GTP binding B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000083750 RRAGB 9606 + X:55717739-55758774 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262850 RRAGB-001 55717885-55758348 protein_coding
  ENST00000374941 RRAGB-002 55717739-55758774 protein_coding
  ENST00000414239 RRAGB-005 55717749-55753475 protein_coding
  ENST00000474757 RRAGB-003 55731401-55751623 processed_transcript
  ENST00000475061 RRAGB-006 55755810-55758382 processed_transcript
  ENST00000498762 RRAGB-004 55722191-55731708 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262850ENST00000374941ENST00000414239ENST00000474757ENST00000475061ENST00000498762
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262850 0.650±0.00 N/A 5.120±2.08 N/A N/A 0.639±0.49 1.886±0.00 0.566±0.34 N/A 0.837±0.00 0.565±0.00 0.705±0.29 N/A
ENST00000374941 1.870±0.00 2.831±0.00 4.313±2.18 2.497±0.00 2.839±2.39 1.804±0.00 1.275±0.99 0.790±0.00 2.458±0.00 0.829±0.70 5.199±4.47 3.097±0.53 3.924±0.87
ENST00000414239 1.584±0.00 3.318±0.00 N/A N/A 2.104±0.00 N/A N/A N/A 3.352±0.00 N/A 3.306±0.52 4.864±0.00 4.583±0.83
ENST00000474757 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A N/A N/A
ENST00000475061 N/A N/A N/A N/A N/A N/A N/A 1.694±0.00 N/A 1.512±0.00 N/A N/A N/A
ENST00000498762 N/A N/A N/A 4.157±0.00 N/A N/A 2.495±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057B CIL_00057B_0001 CGP X:55623400-55758774
CIL_0006LJ CIL_0006LJ_0001 CGP X:55717739-56287889

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0005764 IDA lysosome
GO:0005765 IDA lysosomal membrane
GO:0005794 IDA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0032008 IMP positive regulation of TOR signaling
GO:0032561 IDA guanyl ribonucleotide binding
GO:0034613 IMP cellular protein localization
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0071230 IMP cellular response to amino acid stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039316 rraga Ras-related GTP binding A protein_coding Danio_rerio
ENSMUSG00000041658 Rragb Ras-related GTP binding B protein_coding Mus_musculus

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