C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras-related GTP binding B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414239 RRAGB-005 ENSG00000083750 9606 + X:55717749-55753475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonLungOvaryPlacentaTestisENST00000414239
Transcript ID Adipose Adrenal Colon Lung Ovary Placenta Testis
ENST00000414239 1.584±0.00 3.318±0.00 2.104±0.00 3.352±0.00 3.306±0.52 4.864±0.00 4.583±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057B CIL_00057B_0001 CGP X:55623400-55758774
CIL_0006LJ CIL_0006LJ_0001 CGP X:55717739-56287889

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039720 Rragb-001 protein_coding Mus_musculus 0 658
ENSMUST00000091064 Rraga-001 protein_coding Mus_musculus 0 610
ENSMUST00000144175 Rragb-002 protein_coding Mus_musculus 0 403

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