C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatase and actin regulator 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000087495 PHACTR3 9606 + 20:59577509-59847711 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355648 PHACTR3-007 59676661-59847711 protein_coding
  ENST00000359926 PHACTR3-003 59577509-59847711 protein_coding
  ENST00000361300 PHACTR3-006 59721210-59847711 protein_coding
  ENST00000371015 PHACTR3-001 59604548-59847711 protein_coding
  ENST00000395636 PHACTR3-002 59721210-59847711 protein_coding
  ENST00000434923 PHACTR3-008 59603505-59743113 protein_coding
  ENST00000473657 PHACTR3-005 59843455-59847711 retained_intron
  ENST00000492611 PHACTR3-004 59835853-59847711 retained_intron
  ENST00000541461 PHACTR3-201 59628609-59847709 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355648ENST00000359926ENST00000361300ENST00000371015ENST00000473657ENST00000492611
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355648 N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 0.241±0.00 N/A N/A N/A N/A
ENST00000359926 0.040±0.00 N/A N/A 2.476±0.00 0.549±0.00 0.613±0.00 N/A N/A 0.063±0.03 3.003±0.00 N/A 4.756±4.86 0.240±0.00 0.557±0.31
ENST00000361300 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 0.016±0.00 3.762±0.00 0.169±0.00 N/A
ENST00000371015 N/A N/A N/A 6.483±3.90 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A
ENST00000473657 0.025±0.00 0.013±0.00 0.076±0.00 N/A 0.109±0.00 N/A N/A N/A 0.014±0.00 0.116±0.00 0.045±0.00 0.396±0.07 N/A 0.065±0.00
ENST00000492611 N/A N/A N/A N/A 0.112±0.00 0.294±0.18 2.088±2.03 1.014±0.00 N/A 0.331±0.00 N/A 1.491±1.27 0.377±0.00 0.120±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093L CIL_00093L_0001 VISTA 20:59111478-59715059
CIL_0001SC CIL_0001SC_0001 CGP 20:59577509-59933655

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005634 IDA nucleus
GO:0043086 IEA negative regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019304 phactr3b phosphatase and actin regulator 3b protein_coding Danio_rerio
ENSDARG00000058243 phactr3a phosphatase and actin regulator 3a protein_coding Danio_rerio
ENSMUSG00000027525 Phactr3 phosphatase and actin regulator 3 protein_coding Mus_musculus

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