C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase and actin regulator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492611 PHACTR3-004 ENSG00000087495 9606 + 20:59835853-59847711 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLungOvaryPlacentaTestisENST00000492611
Transcript ID Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000492611 0.112±0.00 0.294±0.18 2.088±2.03 1.014±0.00 0.331±0.00 1.491±1.27 0.377±0.00 0.120±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093L CIL_00093L_0001 VISTA 20:59111478-59715059
CIL_0001SC CIL_0001SC_0001 CGP 20:59577509-59933655

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103065 Phactr3-005 protein_coding Mus_musculus 0 994
ENSMUST00000108915 Phactr3-004 protein_coding Mus_musculus 0 994
ENSMUST00000103066 Phactr3-003 protein_coding Mus_musculus 0 994
ENSMUST00000108916 Phactr3-002 protein_coding Mus_musculus 0 994
ENSMUST00000108917 Phactr3-001 protein_coding Mus_musculus 0 992
ENSMUST00000133267 Phactr3-007 retained_intron Mus_musculus 0 254
ENSMUST00000141272 Phactr3-006 retained_intron Mus_musculus 0 243

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