C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase and actin regulator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359926 PHACTR3-003 ENSG00000087495 9606 + 20:59577509-59847711 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungOvaryPlacentaTestisENST00000359926
Transcript ID Adipose Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000359926 0.040±0.00 2.476±0.00 0.549±0.00 0.613±0.00 0.063±0.03 3.003±0.00 4.756±4.86 0.240±0.00 0.557±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093L CIL_00093L_0001 VISTA 20:59111478-59715059
CIL_0001SC CIL_0001SC_0001 CGP 20:59577509-59933655

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005634 IDA nucleus
GO:0043086 IEA negative regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108916 Phactr3-002 protein_coding Mus_musculus 0 2242
ENSMUST00000108917 Phactr3-001 protein_coding Mus_musculus 0 2228
ENSMUST00000103065 Phactr3-005 protein_coding Mus_musculus 0 2206
ENSMUST00000103066 Phactr3-003 protein_coding Mus_musculus 0 2206
ENSMUST00000108915 Phactr3-004 protein_coding Mus_musculus 0 2204
ENSMUST00000133267 Phactr3-007 retained_intron Mus_musculus 4.2039e-45 187
ENSMUST00000141272 Phactr3-006 retained_intron Mus_musculus 8.00001e-42 176

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