C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoblastoma binding protein 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000089050 RBBP9 9606 - 20:18486540-18497243 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337227 RBBP9-001 18486540-18497243 protein_coding
  ENST00000491835 RBBP9-004 18489459-18497174 processed_transcript
  ENST00000493184 RBBP9-003 18489288-18497180 processed_transcript
  ENST00000622282 RBBP9-201 18489802-18497167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337227ENST00000493184ENST00000622282
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337227 2.472±0.00 4.032±0.00 0.457±0.00 2.923±0.00 2.178±0.91 0.997±0.08 0.876±0.57 4.515±1.09 1.539±0.42 1.766±0.20 0.086±0.00 1.869±0.42 1.934±0.31 2.204±1.68
ENST00000493184 N/A N/A N/A N/A 1.187±0.00 N/A N/A 2.983±0.00 N/A N/A N/A N/A N/A N/A
ENST00000622282 N/A N/A N/A 5.647±0.00 N/A 1.545±0.00 0.936±0.00 N/A 5.005±0.00 N/A 1.212±0.00 4.063±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MV CIL_0002MV_0001 CGP 20:18467127-18497243
CIL_0002MU CIL_0002MU_0001 CGP 20:18486540-18561415

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity
GO:0042127 IEA regulation of cell proliferation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040713 rbbp9 retinoblastoma binding protein 9 protein_coding Danio_rerio
ENSMUSG00000027428 Rbbp9 retinoblastoma binding protein 9 protein_coding Mus_musculus

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