C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoblastoma binding protein 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027428 Rbbp9 10090 - 2:144542265-144550869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028915 Rbbp9-001 144542265-144550869 protein_coding
  ENSMUST00000140340 Rbbp9-002 144543821-144550790 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028915ENSMUST00000140340
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028915 16.857±4.12 10.753±1.25 14.899±0.96 10.022±6.03 8.045±1.06 5.749±1.04 3.999±0.44 20.551±3.17 5.887±1.69 12.900±0.93 1.974±0.36 18.715±5.65 7.196±3.69 1.519±0.62
ENSMUST00000140340 N/A N/A N/A 1.780±0.00 N/A N/A N/A N/A N/A N/A N/A 2.182±0.00 N/A 0.645±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MV CIL_0002MV_0002 CGP 2:144527718-144550869
CIL_0002MU CIL_0002MU_0002 CGP 2:144542265-144590749

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity
GO:0042127 IEA regulation of cell proliferation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040713 rbbp9 retinoblastoma binding protein 9 protein_coding Danio_rerio
ENSG00000089050 RBBP9 retinoblastoma binding protein 9 protein_coding Homo_sapiens

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