C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily M, member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000092439 TRPM7 9606 - 15:50552473-50686815 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313478 TRPM7-001 50557158-50686815 protein_coding
  ENST00000558444 TRPM7-008 50574959-50582464 processed_transcript
  ENST00000560284 TRPM7-006 50593619-50599665 retained_intron
  ENST00000560516 TRPM7-009 50569969-50575085 retained_intron
  ENST00000560638 TRPM7-004 50603947-50624216 protein_coding
  ENST00000560849 TRPM7-007 50575028-50586582 processed_transcript
  ENST00000560955 TRPM7-002 50560293-50686771 protein_coding
  ENST00000561267 TRPM7-010 50552473-50575008 protein_coding
  ENST00000561443 TRPM7-005 50561640-50582469 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313478ENST00000560516ENST00000560638ENST00000560955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313478 N/A N/A N/A 0.364±0.01 N/A N/A 1.229±0.00 N/A N/A N/A N/A 0.912±0.10 0.677±0.37 1.070±0.00
ENST00000560516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.406±0.00 9.562±0.00 10.738±0.00
ENST00000560638 N/A N/A N/A N/A N/A 4.848±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560955 3.212±0.00 4.182±0.00 4.745±0.00 1.442±1.01 4.469±0.83 2.893±1.02 4.172±1.33 7.800±1.85 4.400±2.22 4.556±2.91 0.708±0.41 4.909±2.98 1.973±1.05 3.408±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DY CIL_0002DY_0001 CGP 15:50500562-50686815
CIL_0002DX CIL_0002DX_0001 CGP 15:50552473-50765808

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 IEA actin binding
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005216 IEA ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0006811 IEA ion transport
GO:0006812 IEA cation transport
GO:0006816 IEA calcium ion transport
GO:0010961 IEA cellular magnesium ion homeostasis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016301 IEA kinase activity
GO:0016340 IEA calcium-dependent cell-matrix adhesion
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0017022 IEA myosin binding
GO:0031032 IEA actomyosin structure organization
GO:0034220 TAS ion transmembrane transport
GO:0046777 IEA protein autophosphorylation
GO:0046872 IEA metal ion binding
GO:0055085 TAS:IEA transmembrane transport
GO:0070266 IMP necroptotic process
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036232 trpm7 transient receptor potential cation channel, subfamily M, member 7 protein_coding Danio_rerio
ENSMUSG00000027365 Trpm7 transient receptor potential cation channel, subfamily M, member 7 protein_coding Mus_musculus

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