C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily M, member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027365 Trpm7 10090 - 2:126791565-126876230 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028843 Trpm7-002 126791571-126876117 protein_coding
  ENSMUST00000103224 Trpm7-001 126791565-126876230 protein_coding
  ENSMUST00000125327 Trpm7-009 126797283-126805059 processed_transcript
  ENSMUST00000127277 Trpm7-007 126791584-126795536 retained_intron
  ENSMUST00000132003 Trpm7-008 126829268-126833855 retained_intron
  ENSMUST00000134408 Trpm7-004 126830841-126876186 retained_intron
  ENSMUST00000135733 Trpm7-010 126796994-126797829 retained_intron
  ENSMUST00000136964 Trpm7-011 126792898-126797846 protein_coding
  ENSMUST00000142334 Trpm7-005 126813005-126817666 retained_intron
  ENSMUST00000152615 Trpm7-003 126830844-126834194 retained_intron
  ENSMUST00000155675 Trpm7-006 126792827-126802625 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028843ENSMUST00000103224ENSMUST00000127277ENSMUST00000134408
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028843 N/A N/A N/A 1.774±0.14 1.117±0.00 N/A 0.539±0.00 N/A 1.238±0.28 N/A 1.302±0.46 6.277±2.38 2.396±0.94 N/A
ENSMUST00000103224 5.293±1.44 2.870±0.86 6.307±0.37 5.884±3.01 3.164±0.34 2.370±1.02 3.660±0.69 6.042±1.12 3.899±1.78 4.940±0.58 3.303±0.61 3.439±2.09 6.032±2.16 1.882±0.71
ENSMUST00000127277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.367±0.00 N/A N/A
ENSMUST00000134408 N/A 2.342±1.14 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DY CIL_0002DY_0002 CGP 2:126709096-126876230
CIL_0002DX CIL_0002DX_0002 CGP 2:126791565-126933235

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0003779 IDA actin binding
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005262 IDA calcium channel activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005886 IDA plasma membrane
GO:0006468 IDA protein phosphorylation
GO:0006816 IDA calcium ion transport
GO:0010961 IEA cellular magnesium ion homeostasis
GO:0016021 IEA integral component of membrane
GO:0016301 IDA kinase activity
GO:0016340 IDA calcium-dependent cell-matrix adhesion
GO:0017022 IPI myosin binding
GO:0031032 IDA actomyosin structure organization
GO:0046777 IDA protein autophosphorylation
GO:0046872 IEA metal ion binding
GO:0070266 ISS necroptotic process
GO:0070588 IDA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036232 trpm7 transient receptor potential cation channel, subfamily M, member 7 protein_coding Danio_rerio
ENSG00000092439 TRPM7 transient receptor potential cation channel, subfamily M, member 7 protein_coding Homo_sapiens

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