C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313478 TRPM7-001 ENSG00000092439 9606 - 15:50557158-50686815 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartOvaryPlacentaTestisENST00000313478
Transcript ID Brain Heart Ovary Placenta Testis
ENST00000313478 0.364±0.01 1.229±0.00 0.912±0.10 0.677±0.37 1.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DY CIL_0002DY_0001 CGP 15:50500562-50686815
CIL_0002DX CIL_0002DX_0001 CGP 15:50552473-50765808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 IEA actin binding
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005216 IEA ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0010961 IEA cellular magnesium ion homeostasis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016301 IEA kinase activity
GO:0016340 IEA calcium-dependent cell-matrix adhesion
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0017022 IEA myosin binding
GO:0031032 IEA actomyosin structure organization
GO:0034220 TAS ion transmembrane transport
GO:0046777 IEA protein autophosphorylation
GO:0046872 IEA metal ion binding
GO:0055085 TAS:IEA transmembrane transport
GO:0070266 IMP necroptotic process
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103224 Trpm7-001 protein_coding Mus_musculus 0 7829
ENSMUST00000028843 Trpm7-002 protein_coding Mus_musculus 0 7635
ENSMUST00000134408 Trpm7-004 retained_intron Mus_musculus 0 2590
ENSMUST00000155675 Trpm7-006 retained_intron Mus_musculus 0 1216
ENSMUST00000142334 Trpm7-005 retained_intron Mus_musculus 0 920
ENSMUST00000125327 Trpm7-009 processed_transcript Mus_musculus 0 643
ENSMUST00000136964 Trpm7-011 protein_coding Mus_musculus 0 616
ENSMUST00000135733 Trpm7-010 retained_intron Mus_musculus 0 593
ENSMUST00000132003 Trpm7-008 retained_intron Mus_musculus 0 420
ENSMUST00000127277 Trpm7-007 retained_intron Mus_musculus 0 279
ENSMUST00000152615 Trpm7-003 retained_intron Mus_musculus 0 222
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000003 64

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