C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002DX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000092439-ENSG00000138600 CGP 9606 15:50552473-50765808
GeneTranscriptPositionBiotype
ENSG00000092439 (TRPM7)
transient receptor potential cation channel, subfamily M, member 7 		ENST00000313478 (TRPM7-001) 50557158-50686815 protein_coding
ENST00000558444 (TRPM7-008) 50574959-50582464 processed_transcript
ENST00000560284 (TRPM7-006) 50593619-50599665 retained_intron
ENST00000560516 (TRPM7-009) 50569969-50575085 retained_intron
ENST00000560638 (TRPM7-004) 50603947-50624216 protein_coding
ENST00000560849 (TRPM7-007) 50575028-50586582 processed_transcript
ENST00000560955 (TRPM7-002) 50560293-50686771 protein_coding
ENST00000561267 (TRPM7-010) 50552473-50575008 protein_coding
ENST00000561443 (TRPM7-005) 50561640-50582469 processed_transcript
ENSG00000138600 (SPPL2A)
signal peptide peptidase like 2A 		ENST00000261854 (SPPL2A-001) 50702266-50765808 protein_coding
ENST00000558146 (SPPL2A-006) 50722173-50725519 retained_intron
ENST00000558414 (SPPL2A-003) 50747504-50764561 protein_coding
ENST00000558934 (SPPL2A-004) 50707448-50747531 protein_coding
ENST00000559293 (SPPL2A-005) 50722141-50726327 processed_transcript
ENST00000559527 (SPPL2A-007) 50725916-50747508 retained_intron
ENST00000560288 (SPPL2A-002) 50747997-50765709 retained_intron
ENSG00000243027 (RN7SL354P)
RNA, 7SL, cytoplasmic 354, pseudogene 		ENST00000469282 (RN7SL354P-201) 50688900-50689193 misc_RNA
ENSG00000279665 (RP11-507J18.5)
 ENST00000624738 (RP11-507J18.5-001) 50742702-50743276 TEC
CIL_0002DX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027365-ENSMUSG00000027366 CGP 10090 2:126791565-126933235
GeneTranscriptPositionBiotype
ENSMUSG00000027365 (Trpm7)
transient receptor potential cation channel, subfamily M, member 7 		ENSMUST00000028843 (Trpm7-002) 126791571-126876117 protein_coding
ENSMUST00000103224 (Trpm7-001) 126791565-126876230 protein_coding
ENSMUST00000125327 (Trpm7-009) 126797283-126805059 processed_transcript
ENSMUST00000127277 (Trpm7-007) 126791584-126795536 retained_intron
ENSMUST00000132003 (Trpm7-008) 126829268-126833855 retained_intron
ENSMUST00000134408 (Trpm7-004) 126830841-126876186 retained_intron
ENSMUST00000135733 (Trpm7-010) 126796994-126797829 retained_intron
ENSMUST00000136964 (Trpm7-011) 126792898-126797846 protein_coding
ENSMUST00000142334 (Trpm7-005) 126813005-126817666 retained_intron
ENSMUST00000152615 (Trpm7-003) 126830844-126834194 retained_intron
ENSMUST00000155675 (Trpm7-006) 126792827-126802625 retained_intron
ENSMUSG00000027366 (Sppl2a)
signal peptide peptidase like 2A 		ENSMUST00000028844 (Sppl2a-001) 126890391-126933235 protein_coding
ENSMUST00000125592 (Sppl2a-002) 126914874-126923688 retained_intron
ENSMUST00000143700 (Sppl2a-003) 126894264-126920345 protein_coding
ENSMUSG00000081894 (Gm14212)
predicted gene 14212 		ENSMUST00000122023 (Gm14212-001) 126864503-126865328 processed_pseudogene
ENSMUSG00000098896 (Mir3473g)
microRNA 3473g 		ENSMUST00000183494 (Mir3473g-201) 126902250-126902385 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DX_0001ENSG00000092439ENST00000313478ENST00000558444ENST00000560284ENST00000560516ENST00000560638ENST00000560849ENST00000560955ENST00000561267ENST00000561443ENSG00000138600ENST00000261854ENST00000558146ENST00000558414ENST00000558934ENST00000559293ENST00000559527ENST00000560288ENSG00000243027ENST00000469282ENSG00000279665ENST00000624738CIL_0002DX_0002ENSMUSG00000027365ENSMUST00000028843ENSMUST00000103224ENSMUST00000125327ENSMUST00000127277ENSMUST00000132003ENSMUST00000134408ENSMUST00000135733ENSMUST00000136964ENSMUST00000142334ENSMUST00000152615ENSMUST00000155675ENSMUSG00000027366ENSMUST00000028844ENSMUST00000125592ENSMUST00000143700ENSMUSG00000081894ENSMUST00000122023ENSMUSG00000098896ENSMUST00000183494
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DX_0001ENSG00000092439ENST00000313478ENST00000560516ENST00000560638ENST00000560955ENSG00000138600ENST00000261854ENST00000558414ENST00000558934ENST00000560288ENSG00000243027ENST00000469282ENSG00000279665ENST00000624738CIL_0002DX_0002ENSMUSG00000027365ENSMUST00000028843ENSMUST00000103224ENSMUST00000127277ENSMUST00000134408ENSMUSG00000027366ENSMUST00000028844ENSMUST00000143700ENSMUSG00000081894ENSMUST00000122023ENSMUSG00000098896ENSMUST00000183494
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092439 ENST00000313478 N/A N/A N/A 0.364±0.01 N/A N/A 1.229±0.00 N/A N/A N/A N/A 0.912±0.10 0.677±0.37 1.070±0.00
ENST00000558444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.406±0.00 9.562±0.00 10.738±0.00
ENST00000560638 N/A N/A N/A N/A N/A 4.848±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560955 3.212±0.00 4.182±0.00 4.745±0.00 1.442±1.01 4.469±0.83 2.893±1.02 4.172±1.33 7.800±1.85 4.400±2.22 4.556±2.91 0.708±0.41 4.909±2.98 1.973±1.05 3.408±0.07
ENST00000561267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138600 ENST00000261854 7.345±0.00 7.095±0.00 1.281±0.00 1.388±0.83 7.090±0.00 5.906±1.80 5.753±3.24 9.254±0.00 2.079±0.78 3.668±0.00 17.446±16.55 4.002±0.72 4.497±2.00 3.037±1.32
ENST00000558146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558414 N/A N/A N/A 6.347±0.00 N/A 29.976±0.00 7.569±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000558934 10.672±0.00 11.239±0.00 N/A 2.371±0.00 10.084±0.00 6.401±0.00 8.344±0.00 12.649±0.00 12.786±0.00 8.509±0.00 N/A 4.379±0.04 11.869±2.86 5.930±1.16
ENST00000559293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560288 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.576±0.00 N/A N/A N/A N/A
ENSG00000243027 ENST00000469282 N/A N/A N/A N/A 0.749±0.00 N/A N/A N/A N/A N/A N/A N/A 0.294±0.00 N/A
ENSG00000279665 ENST00000624738 0.050±0.00 0.599±0.00 0.434±0.00 0.253±0.04 0.489±0.03 0.160±0.00 0.300±0.13 0.025±0.00 0.460±0.42 0.112±0.04 0.118±0.00 0.402±0.39 0.076±0.00 0.116±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027365 ENSMUST00000028843 N/A N/A N/A 1.774±0.14 1.117±0.00 N/A 0.539±0.00 N/A 1.238±0.28 N/A 1.302±0.46 6.277±2.38 2.396±0.94 N/A
ENSMUST00000103224 5.293±1.44 2.870±0.86 6.307±0.37 5.884±3.01 3.164±0.34 2.370±1.02 3.660±0.69 6.042±1.12 3.899±1.78 4.940±0.58 3.303±0.61 3.439±2.09 6.032±2.16 1.882±0.71
ENSMUST00000125327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.367±0.00 N/A N/A
ENSMUST00000132003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134408 N/A 2.342±1.14 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027366 ENSMUST00000028844 10.563±1.00 19.523±1.71 14.626±4.36 6.362±3.85 13.243±2.10 22.538±4.95 8.199±0.48 12.924±1.49 18.570±8.93 15.495±0.86 8.249±2.77 10.966±2.90 3.823±2.16 2.773±0.41
ENSMUST00000125592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143700 N/A N/A N/A N/A 14.875±0.00 N/A N/A N/A N/A N/A N/A N/A 6.088±1.32 7.266±1.67
ENSMUSG00000081894 ENSMUST00000122023 0.305±0.06 0.516±0.25 0.160±0.03 0.849±0.39 0.517±0.09 0.412±0.28 0.128±0.07 0.556±0.31 0.227±0.18 0.628±0.04 N/A 0.820±0.37 0.320±0.24 0.240±0.09
ENSMUSG00000098896 ENSMUST00000183494 N/A N/A 9.386±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.654±0.00

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