C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560955 TRPM7-002 ENSG00000092439 9606 - 15:50560293-50686771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000560955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000560955 3.212±0.00 4.182±0.00 4.745±0.00 1.442±1.01 4.469±0.83 2.893±1.02 4.172±1.33 7.800±1.85 4.400±2.22 4.556±2.91 0.708±0.41 4.909±2.98 1.973±1.05 3.408±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DY CIL_0002DY_0001 CGP 15:50500562-50686815
CIL_0002DX CIL_0002DX_0001 CGP 15:50552473-50765808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005216 IEA ion channel activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0006811 IEA ion transport
GO:0006812 IEA cation transport
GO:0010961 IEA cellular magnesium ion homeostasis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0034220 IEA ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103224 Trpm7-001 protein_coding Mus_musculus 0 7792
ENSMUST00000028843 Trpm7-002 protein_coding Mus_musculus 0 7642
ENSMUST00000134408 Trpm7-004 retained_intron Mus_musculus 0 2590
ENSMUST00000155675 Trpm7-006 retained_intron Mus_musculus 0 1216
ENSMUST00000142334 Trpm7-005 retained_intron Mus_musculus 0 920
ENSMUST00000125327 Trpm7-009 processed_transcript Mus_musculus 0 643
ENSMUST00000136964 Trpm7-011 protein_coding Mus_musculus 0 616
ENSMUST00000135733 Trpm7-010 retained_intron Mus_musculus 0 593
ENSMUST00000132003 Trpm7-008 retained_intron Mus_musculus 0 420
ENSMUST00000127277 Trpm7-007 retained_intron Mus_musculus 0 279
ENSMUST00000152615 Trpm7-003 retained_intron Mus_musculus 0 222

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