C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: G patch domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000092978 GPATCH2 9606 - 1:217426992-217631082 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366934 GPATCH2-002 217608184-217631082 protein_coding
  ENST00000366935 GPATCH2-001 217426992-217631082 protein_coding
  ENST00000470014 GPATCH2-005 217492501-217610400 processed_transcript
  ENST00000485274 GPATCH2-003 217498180-217610379 processed_transcript
  ENST00000489246 GPATCH2-004 217491506-217498764 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366934ENST00000366935
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366934 0.555±0.00 1.078±0.00 0.870±0.00 1.010±0.60 1.922±1.12 2.237±0.56 0.466±0.07 0.854±0.31 1.730±1.44 2.267±1.71 0.226±0.01 2.261±0.83 0.821±0.06 1.877±0.00
ENST00000366935 0.372±0.00 0.732±0.00 0.677±0.00 1.013±0.00 0.539±0.02 0.619±0.38 0.554±0.30 0.515±0.10 0.606±0.30 0.415±0.00 0.252±0.00 0.521±0.04 0.528±0.07 1.625±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JY CIL_0007JY_0001 UCNEbase 1:215651193-218349979
CIL_000122 CIL_000122_0002 CGP 1:216503246-217631082
CIL_000994 CIL_000994_0001 VISTA 1:217292780-217894009

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0010923 IDA negative regulation of phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031064 gpatch2 G patch domain containing 2 protein_coding Danio_rerio
ENSMUSG00000039210 Gpatch2 G patch domain containing 2 protein_coding Mus_musculus

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