C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tudor domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000095627 TDRD1 9606 + 10:114179270-114232304 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251864 TDRD1-201 114179270-114232304 protein_coding
  ENST00000369280 TDRD1-001 114179590-114228417 protein_coding
  ENST00000369282 TDRD1-002 114179270-114231727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251864ENST00000369280ENST00000369282
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251864 0.030±0.00 0.069±0.00 0.203±0.00 0.043±0.00 0.067±0.04 N/A 0.055±0.00 N/A N/A 0.044±0.00 0.002±0.00 0.023±0.00 0.025±0.00 4.065±0.00
ENST00000369280 N/A 0.025±0.00 N/A 0.016±0.00 N/A N/A N/A 0.019±0.00 0.009±0.00 N/A N/A 0.008±0.00 N/A N/A
ENST00000369282 N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A 0.009±0.00 0.021±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OO CIL_0006OO_0001 CGP 10:114120862-114232304
CIL_0002OH CIL_0002OH_0001 CGP 10:114179270-114291513

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007281 ISS germ cell development
GO:0007283 ISS spermatogenesis
GO:0030529 IEA ribonucleoprotein complex
GO:0031047 ISS gene silencing by RNA
GO:0033391 IEA chromatoid body
GO:0034587 ISS piRNA metabolic process
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0043186 ISS P granule
GO:0046872 IEA metal ion binding
GO:0051321 IEA meiotic cell cycle
GO:0071546 ISS pi-body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007465 tdrd1 tudor domain containing 1 protein_coding Danio_rerio
ENSMUSG00000025081 Tdrd1 tudor domain containing 1 protein_coding Mus_musculus

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