C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095627-ENSG00000165816 CGP 9606 10:114179270-114291513
GeneTranscriptPositionBiotype
ENSG00000095627 (TDRD1)
tudor domain containing 1 		ENST00000251864 (TDRD1-201) 114179270-114232304 protein_coding
ENST00000369280 (TDRD1-001) 114179590-114228417 protein_coding
ENST00000369282 (TDRD1-002) 114179270-114231727 protein_coding
ENSG00000165816 (VWA2)
von Willebrand factor A domain containing 2 		ENST00000298715 (VWA2-002) 114239330-114289992 retained_intron
ENST00000392982 (VWA2-001) 114239330-114291513 protein_coding
ENST00000603594 (VWA2-201) 114239356-114289873 protein_coding
ENSG00000230165 (CTB-1144G6.5)
 ENST00000454983 (CTB-1144G6.5-001) 114246074-114246714 processed_pseudogene
ENSG00000275024 (CTB-1144G6.6)
 ENST00000622689 (CTB-1144G6.6-001) 114280725-114281258 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0002OH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025081-ENSMUSG00000025082 CGP 10090 19:56826209-56912078
GeneTranscriptPositionBiotype
ENSMUSG00000025081 (Tdrd1)
tudor domain containing 1 		ENSMUST00000078723 (Tdrd1-003) 56826275-56870012 protein_coding
ENSMUST00000111604 (Tdrd1-004) 56830712-56870012 protein_coding
ENSMUST00000111606 (Tdrd1-002) 56826209-56870012 protein_coding
ENSMUST00000121249 (Tdrd1-001) 56826286-56870012 protein_coding
ENSMUSG00000025082 (Vwa2)
von Willebrand factor A domain containing 2 		ENSMUST00000026068 (Vwa2-001) 56874249-56912078 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OH_0001ENSG00000095627ENST00000251864ENST00000369280ENST00000369282ENSG00000165816ENST00000298715ENST00000392982ENST00000603594ENSG00000230165ENST00000454983ENSG00000275024ENST00000622689CIL_0002OH_0002ENSMUSG00000025081ENSMUST00000078723ENSMUST00000111604ENSMUST00000111606ENSMUST00000121249ENSMUSG00000025082ENSMUST00000026068
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OH_0001ENSG00000095627ENST00000251864ENST00000369280ENST00000369282ENSG00000165816ENST00000298715ENST00000392982ENST00000603594ENSG00000230165ENST00000454983ENSG00000275024ENST00000622689CIL_0002OH_0002ENSMUSG00000025081ENSMUST00000078723ENSMUST00000111604ENSMUST00000111606ENSMUST00000121249ENSMUSG00000025082ENSMUST00000026068
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095627 ENST00000251864 0.030±0.00 0.069±0.00 0.203±0.00 0.043±0.00 0.067±0.04 N/A 0.055±0.00 N/A N/A 0.044±0.00 0.002±0.00 0.023±0.00 0.025±0.00 4.065±0.00
ENST00000369280 N/A 0.025±0.00 N/A 0.016±0.00 N/A N/A N/A 0.019±0.00 0.009±0.00 N/A N/A 0.008±0.00 N/A N/A
ENST00000369282 N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A 0.009±0.00 0.021±0.01 N/A
ENSG00000165816 ENST00000298715 N/A N/A N/A 0.169±0.00 0.141±0.00 0.060±0.00 N/A 0.187±0.00 0.174±0.15 N/A N/A N/A 0.071±0.00 N/A
ENST00000392982 0.198±0.00 N/A N/A N/A 0.900±0.00 N/A 0.009±0.00 N/A N/A 0.751±0.00 N/A 2.226±1.86 0.282±0.18 0.585±0.00
ENST00000603594 N/A N/A 0.029±0.00 0.020±0.00 N/A N/A N/A 0.030±0.00 N/A N/A 0.224±0.00 0.244±0.00 0.039±0.00 N/A
ENSG00000230165 ENST00000454983 N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A 0.416±0.00 N/A 0.419±0.00
ENSG00000275024 ENST00000622689 N/A N/A N/A N/A 0.108±0.00 N/A 0.232±0.00 N/A N/A 0.260±0.00 N/A 0.495±0.37 0.238±0.02 0.170±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025081 ENSMUST00000078723 0.044±0.04 N/A 0.020±0.01 0.043±0.03 0.007±0.00 0.404±0.09 0.014±0.01 0.016±0.01 0.017±0.01 0.021±0.02 N/A 1.303±0.50 0.464±0.22 17.197±6.93
ENSMUST00000111604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.432±0.00 N/A N/A
ENSMUST00000111606 0.002±0.00 N/A N/A 0.074±0.06 0.010±0.01 N/A 0.006±0.00 0.005±0.00 0.020±0.00 N/A N/A 0.976±0.14 0.220±0.10 14.830±6.33
ENSMUST00000121249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A
ENSMUSG00000025082 ENSMUST00000026068 4.610±4.75 N/A 0.011±0.00 0.299±0.09 0.304±0.06 0.192±0.07 0.013±0.00 4.293±1.33 0.012±0.01 0.065±0.02 0.033±0.02 1.570±0.72 0.130±0.06 0.228±0.17

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