C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tudor domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025081 Tdrd1 10090 + 19:56826209-56870012 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078723 Tdrd1-003 56826275-56870012 protein_coding
  ENSMUST00000111604 Tdrd1-004 56830712-56870012 protein_coding
  ENSMUST00000111606 Tdrd1-002 56826209-56870012 protein_coding
  ENSMUST00000121249 Tdrd1-001 56826286-56870012 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000078723ENSMUST00000111604ENSMUST00000111606ENSMUST00000121249
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000078723 0.044±0.04 0.020±0.01 0.043±0.03 0.007±0.00 0.404±0.09 0.014±0.01 0.016±0.01 0.017±0.01 0.021±0.02 1.303±0.50 0.464±0.22 17.197±6.93
ENSMUST00000111604 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.432±0.00 N/A N/A
ENSMUST00000111606 0.002±0.00 N/A 0.074±0.06 0.010±0.01 N/A 0.006±0.00 0.005±0.00 0.020±0.00 N/A 0.976±0.14 0.220±0.10 14.830±6.33
ENSMUST00000121249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OO CIL_0006OO_0002 CGP 19:56787481-56870012
CIL_0002OH CIL_0002OH_0002 CGP 19:56826209-56912078

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007281 IMP germ cell development
GO:0007283 IMP spermatogenesis
GO:0030529 IDA ribonucleoprotein complex
GO:0031047 IMP gene silencing by RNA
GO:0033391 IDA chromatoid body
GO:0034587 IMP piRNA metabolic process
GO:0043046 IMP DNA methylation involved in gamete generation
GO:0043186 IDA P granule
GO:0046872 IEA metal ion binding
GO:0051321 IEA meiotic cell cycle
GO:0071546 IDA pi-body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007465 tdrd1 tudor domain containing 1 protein_coding Danio_rerio
ENSG00000095627 TDRD1 tudor domain containing 1 protein_coding Homo_sapiens

Loading