C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006OO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165813-ENSG00000095627 CGP 9606 10:114120862-114232304
GeneTranscriptPositionBiotype
ENSG00000095627 (TDRD1)
tudor domain containing 1
ENST00000251864 (TDRD1-201) 114179270-114232304 protein_coding
ENST00000369280 (TDRD1-001) 114179590-114228417 protein_coding
ENST00000369282 (TDRD1-002) 114179270-114231727 protein_coding
ENSG00000165813 (CCDC186)
coiled-coil domain containing 186
ENST00000369285 (CCDC186-003) 114161608-114174202 protein_coding
ENST00000369286 (CCDC186-002) 114161608-114174220 protein_coding
ENST00000369287 (CCDC186-006) 114120862-114174220 protein_coding
ENST00000428953 (CCDC186-001) 114124929-114144602 protein_coding
ENST00000490661 (CCDC186-005) 114131026-114132094 retained_intron
ENST00000497592 (CCDC186-004) 114130199-114131336 processed_transcript
CIL_0006OO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035173-ENSMUSG00000025081 CGP 10090 19:56787481-56870012
GeneTranscriptPositionBiotype
ENSMUSG00000025081 (Tdrd1)
tudor domain containing 1
ENSMUST00000078723 (Tdrd1-003) 56826275-56870012 protein_coding
ENSMUST00000111604 (Tdrd1-004) 56830712-56870012 protein_coding
ENSMUST00000111606 (Tdrd1-002) 56826209-56870012 protein_coding
ENSMUST00000121249 (Tdrd1-001) 56826286-56870012 protein_coding
ENSMUSG00000035173 (A630007B06Rik)
coiled-coil domain containing 186
ENSMUST00000076085 (A630007B06Rik-201) 56790963-56813683 protein_coding
ENSMUST00000118592 (A630007B06Rik-001) 56787481-56822190 protein_coding
ENSMUST00000135666 (A630007B06Rik-005) 56790531-56795155 protein_coding
ENSMUST00000140184 (A630007B06Rik-002) 56800039-56822190 retained_intron
ENSMUST00000140705 (A630007B06Rik-004) 56792962-56797508 retained_intron
ENSMUST00000156708 (A630007B06Rik-003) 56797349-56800986 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OO_0001ENSG00000095627ENST00000251864ENST00000369280ENST00000369282ENSG00000165813ENST00000369285ENST00000369286ENST00000369287ENST00000428953ENST00000490661ENST00000497592CIL_0006OO_0002ENSMUSG00000025081ENSMUST00000078723ENSMUST00000111604ENSMUST00000111606ENSMUST00000121249ENSMUSG00000035173ENSMUST00000076085ENSMUST00000118592ENSMUST00000135666ENSMUST00000140184ENSMUST00000140705ENSMUST00000156708
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OO_0001ENSG00000095627ENST00000251864ENST00000369280ENST00000369282ENSG00000165813ENST00000369285ENST00000369286ENST00000369287ENST00000428953CIL_0006OO_0002ENSMUSG00000025081ENSMUST00000078723ENSMUST00000111604ENSMUST00000111606ENSMUST00000121249ENSMUSG00000035173ENSMUST00000076085ENSMUST00000118592ENSMUST00000140184
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095627 ENST00000251864 0.030±0.00 0.069±0.00 0.203±0.00 0.043±0.00 0.067±0.04 N/A 0.055±0.00 N/A N/A 0.044±0.00 0.002±0.00 0.023±0.00 0.025±0.00 4.065±0.00
ENST00000369280 N/A 0.025±0.00 N/A 0.016±0.00 N/A N/A N/A 0.019±0.00 0.009±0.00 N/A N/A 0.008±0.00 N/A N/A
ENST00000369282 N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A 0.009±0.00 0.021±0.01 N/A
ENSG00000165813 ENST00000369285 N/A N/A N/A N/A N/A N/A 1.563±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000369286 N/A N/A N/A N/A N/A N/A N/A 1.075±0.00 N/A N/A N/A N/A N/A N/A
ENST00000369287 0.795±0.00 1.607±0.00 2.852±0.00 1.679±1.14 2.777±2.29 2.923±1.72 1.261±0.13 4.209±0.00 1.669±1.12 2.238±0.50 N/A 2.897±2.19 1.309±0.74 2.746±0.72
ENST00000428953 N/A N/A N/A 1.397±0.00 N/A N/A N/A N/A N/A 3.698±0.00 N/A 2.961±0.00 2.745±0.00 5.258±2.79
ENST00000490661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025081 ENSMUST00000078723 0.044±0.04 N/A 0.020±0.01 0.043±0.03 0.007±0.00 0.404±0.09 0.014±0.01 0.016±0.01 0.017±0.01 0.021±0.02 N/A 1.303±0.50 0.464±0.22 17.197±6.93
ENSMUST00000111604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.432±0.00 N/A N/A
ENSMUST00000111606 0.002±0.00 N/A N/A 0.074±0.06 0.010±0.01 N/A 0.006±0.00 0.005±0.00 0.020±0.00 N/A N/A 0.976±0.14 0.220±0.10 14.830±6.33
ENSMUST00000121249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A
ENSMUSG00000035173 ENSMUST00000076085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.313±0.00 6.484±1.92 3.496±0.00 29.933±39.84
ENSMUST00000118592 0.799±0.00 0.955±0.33 2.613±0.51 3.362±0.81 1.009±0.30 1.713±0.97 1.164±0.54 1.144±0.37 1.028±0.29 2.579±0.88 2.179±0.42 1.888±0.92 3.462±1.55 2.489±0.85
ENSMUST00000135666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140184 N/A 5.354±0.13 N/A 18.230±0.00 N/A N/A N/A N/A N/A N/A N/A 21.212±0.00 16.416±0.00 204.281±0.00
ENSMUST00000140705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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