C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heterogeneous nuclear ribonucleoprotein H3 (2H9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486854 HNRNPH3-009 ENSG00000096746 9606 + 10:68332103-68339201 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000486854
Transcript ID Ovary Placenta Testis
ENST00000486854 56.627±0.00 56.566±0.00 102.284±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H3 CIL_0000H3_0002 CGP 10:68282660-68343191
CIL_0000PX CIL_0000PX_0002 CGP 10:68331174-68407294

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020263 Hnrnph3-001 protein_coding Mus_musculus 0 909
ENSMUST00000118898 Hnrnph3-002 protein_coding Mus_musculus 0 739
ENSMUST00000140743 Hnrnph3-003 nonsense_mediated_decay Mus_musculus 0 433
ENSMUST00000119814 Hnrnph3-004 protein_coding Mus_musculus 0 344
ENSDART00000057651 HNRNPH3-201 protein_coding Danio_rerio 0 270
ENSDART00000113082 HNRNPH3-001 protein_coding Danio_rerio 0 270
ENSMUST00000069304 Hnrnph1-201 protein_coding Mus_musculus 0 248
ENSMUST00000134230 Hnrnph1-009 processed_transcript Mus_musculus 0 248
ENSMUST00000077817 Hnrnph1-006 protein_coding Mus_musculus 0 248
ENSMUST00000127964 Hnrnph1-010 processed_transcript Mus_musculus 0 248
ENSMUST00000109142 Hnrnph1-005 protein_coding Mus_musculus 0 248
ENSDART00000059918 hnrnph1-201 protein_coding Danio_rerio 0 246
ENSDART00000015636 hnrnph1l-001 protein_coding Danio_rerio 0 237
ENSMUST00000133435 Hnrnph1-013 processed_transcript Mus_musculus 0 235
ENSMUST00000123371 Hnrnph1-008 processed_transcript Mus_musculus 0 195
ENSMUST00000126737 Hnrnph1-007 processed_transcript Mus_musculus 0 195
ENSMUST00000143689 Hnrnph3-005 retained_intron Mus_musculus 7e-18 95

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