C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000PX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039466-ENSDARG00000062019 CGP 7955 13:23003728-23047472
GeneTranscriptPositionBiotype
ENSDARG00000039466 (HNRNPH3)
heterogeneous nuclear ribonucleoprotein H3 (2H9) 		ENSDART00000057651 (HNRNPH3-201) 23005952-23012160 protein_coding
ENSDART00000108951 (HNRNPH3-002) 23003757-23012629 nonsense_mediated_decay
ENSDART00000113082 (HNRNPH3-001) 23003728-23012160 protein_coding
ENSDARG00000062019 (rufy2)
RUN and FYVE domain containing 2 		ENSDART00000089133 (rufy2-002) 23016679-23043458 protein_coding
ENSDART00000143097 (rufy2-001) 23016679-23047472 protein_coding
CIL_0000PX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000096746-ENSG00000204130 CGP 9606 10:68331174-68407294
GeneTranscriptPositionBiotype
ENSG00000096746 (HNRNPH3)
heterogeneous nuclear ribonucleoprotein H3 (2H9) 		ENST00000265866 (HNRNPH3-012) 68332075-68343187 protein_coding
ENST00000354695 (HNRNPH3-003) 68332122-68342272 protein_coding
ENST00000461310 (HNRNPH3-010) 68331721-68339546 processed_transcript
ENST00000467249 (HNRNPH3-001) 68332117-68338675 processed_transcript
ENST00000469172 (HNRNPH3-004) 68331174-68342273 processed_transcript
ENST00000478698 (HNRNPH3-008) 68338806-68342269 processed_transcript
ENST00000480987 (HNRNPH3-011) 68332076-68341287 processed_transcript
ENST00000481819 (HNRNPH3-006) 68336806-68342271 processed_transcript
ENST00000486854 (HNRNPH3-009) 68332103-68339201 processed_transcript
ENST00000490442 (HNRNPH3-007) 68338340-68342269 processed_transcript
ENST00000491200 (HNRNPH3-005) 68337616-68343191 processed_transcript
ENSG00000108187 (PBLD)
phenazine biosynthesis-like protein domain containing 		ENST00000277795 (PBLD-003) 68287027-68306879 retained_intron
ENST00000309049 (PBLD-001) 68283064-68332906 protein_coding
ENST00000336578 (PBLD-002) 68282660-68297134 protein_coding
ENST00000358769 (PBLD-201) 68282660-68332927 protein_coding
ENST00000468798 (PBLD-006) 68283064-68288963 protein_coding
ENST00000478192 (PBLD-007) 68295947-68306829 retained_intron
ENST00000495025 (PBLD-004) 68285081-68333049 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PX_0001ENSDARG00000039466ENSDART00000057651ENSDART00000108951ENSDART00000113082ENSDARG00000062019ENSDART00000089133ENSDART00000143097CIL_0000PX_0002ENSG00000096746ENST00000265866ENST00000354695ENST00000461310ENST00000467249ENST00000469172ENST00000478698ENST00000480987ENST00000481819ENST00000486854ENST00000490442ENST00000491200ENSG00000108187ENST00000277795ENST00000309049ENST00000336578ENST00000358769ENST00000468798ENST00000478192ENST00000495025
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PX_0001ENSDARG00000039466ENSDART00000057651ENSDART00000108951ENSDART00000113082ENSDARG00000062019ENSDART00000089133ENSDART00000143097CIL_0000PX_0002ENSG00000096746ENST00000265866ENST00000354695ENST00000461310ENST00000467249ENST00000478698ENST00000480987ENST00000481819ENST00000486854ENST00000491200ENSG00000108187ENST00000277795ENST00000309049ENST00000336578ENST00000358769ENST00000495025
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039466 ENSDART00000057651 N/A N/A N/A 3.510±0.00 N/A N/A 2.588±0.00 2.291±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000108951 N/A N/A N/A 2.861±1.18 N/A N/A 4.456±0.23 4.988±0.00 N/A N/A 1.674±0.00 N/A N/A N/A
ENSDART00000113082 N/A N/A N/A 1.557±0.00 N/A N/A 3.486±0.00 N/A 0.595±0.00 N/A 1.185±0.00 N/A N/A N/A
ENSDARG00000062019 ENSDART00000089133 N/A N/A N/A 19.191±2.33 N/A N/A 0.780±0.53 1.372±0.56 0.312±0.00 N/A 0.556±0.00 N/A N/A N/A
ENSDART00000143097 N/A N/A N/A 16.249±0.00 N/A N/A 1.031±1.00 5.062±4.33 0.078±0.00 N/A 0.707±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000096746 ENST00000265866 17.045±0.00 19.943±0.00 3.819±0.00 14.653±10.31 21.669±0.00 58.151±0.00 13.626±0.00 41.353±0.00 7.223±0.13 28.017±0.00 11.924±8.78 40.826±13.26 20.480±3.02 32.887±9.35
ENST00000354695 42.915±0.00 37.063±0.00 N/A 30.036±0.00 37.646±0.00 83.341±0.00 20.484±0.00 46.168±0.00 9.620±0.00 55.958±0.00 28.344±0.00 47.957±11.62 25.407±2.22 61.147±0.00
ENST00000461310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.346±0.00 N/A
ENST00000467249 N/A N/A N/A N/A N/A 14.951±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478698 N/A 14.927±0.00 4.747±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 71.403±0.00 44.825±0.00 87.596±0.00
ENST00000481819 N/A 9.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.627±0.00 56.566±0.00 102.284±0.00
ENST00000490442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491200 N/A N/A N/A N/A N/A N/A 1.690±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000108187 ENST00000277795 N/A 0.323±0.00 N/A N/A N/A 1.106±0.00 N/A N/A 0.317±0.00 N/A N/A 0.159±0.00 N/A N/A
ENST00000309049 N/A 0.557±0.00 13.403±0.00 0.702±0.00 0.443±0.00 4.002±0.00 N/A 24.317±0.00 0.733±0.00 N/A 0.092±0.00 1.157±0.00 0.605±0.24 N/A
ENST00000336578 N/A N/A N/A N/A 0.691±0.00 N/A N/A 7.277±0.00 N/A N/A N/A N/A N/A N/A
ENST00000358769 1.559±0.00 0.981±0.00 N/A 1.437±1.27 2.370±1.45 2.795±0.00 0.583±0.25 14.918±1.01 23.749±23.42 1.065±0.00 0.190±0.00 0.960±0.48 0.738±0.00 0.612±0.00
ENST00000468798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495025 N/A 0.698±0.00 N/A 0.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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