C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEP domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535622 DEPDC5-203 ENSG00000100150 9606 + 22:31753951-31907034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLungOvaryPlacentaTestisENST00000535622
Transcript ID Adipose Adrenal Breast Colon Heart Lung Ovary Placenta Testis
ENST00000535622 0.421±0.00 0.724±0.00 0.294±0.00 0.937±0.04 0.078±0.00 0.475±0.00 0.982±0.00 1.339±0.00 0.937±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NJ CIL_0002NJ_0001 CGP 22:31676256-31907034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005765 IDA lysosomal membrane
GO:0005829 ISS cytosol
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137169 Depdc5-015 protein_coding Mus_musculus 0 3245
ENSMUST00000120902 Depdc5-014 protein_coding Mus_musculus 0 3094
ENSMUST00000049780 Depdc5-006 protein_coding Mus_musculus 0 2645
ENSMUST00000119705 Depdc5-002 protein_coding Mus_musculus 0 2645
ENSMUST00000087897 Depdc5-001 protein_coding Mus_musculus 0 2645
ENSMUST00000139098 Depdc5-004 retained_intron Mus_musculus 0 1797
ENSMUST00000124780 Depdc5-005 nonsense_mediated_decay Mus_musculus 0 1555
ENSMUST00000118698 Depdc5-007 protein_coding Mus_musculus 0 946
ENSDART00000111088 depdc5-201 protein_coding Danio_rerio 0 813
ENSDART00000134059 depdc5-001 protein_coding Danio_rerio 0 769
ENSMUST00000149350 Depdc5-013 protein_coding Mus_musculus 0 767
ENSMUST00000139463 Depdc5-003 retained_intron Mus_musculus 0 728
ENSMUST00000125574 Depdc5-009 protein_coding Mus_musculus 0 628
ENSMUST00000127560 Depdc5-012 retained_intron Mus_musculus 0 399
ENSMUST00000141812 Depdc5-010 retained_intron Mus_musculus 0 359
ENSMUST00000150130 Depdc5-008 protein_coding Mus_musculus 1.00053e-42 180

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