C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEP domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448753 DEPDC5-003 ENSG00000100150 9606 + 22:31819066-31906998 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyTestisENST00000448753
Transcript ID Bladder Heart Kidney Testis
ENST00000448753 0.354±0.00 0.526±0.00 1.214±0.00 1.749±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NJ CIL_0002NJ_0001 CGP 22:31676256-31907034

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124780 Depdc5-005 nonsense_mediated_decay Mus_musculus 0 3410
ENSMUST00000087897 Depdc5-001 protein_coding Mus_musculus 0 1829
ENSMUST00000119705 Depdc5-002 protein_coding Mus_musculus 0 1677
ENSMUST00000137169 Depdc5-015 protein_coding Mus_musculus 0 1386
ENSMUST00000120902 Depdc5-014 protein_coding Mus_musculus 0 1386
ENSMUST00000049780 Depdc5-006 protein_coding Mus_musculus 0 1205
ENSDART00000134059 depdc5-001 protein_coding Danio_rerio 0 501
ENSDART00000111088 depdc5-201 protein_coding Danio_rerio 0 499
ENSMUST00000141812 Depdc5-010 retained_intron Mus_musculus 0 359

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