C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor 20 (AR1)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100207 TCF20 9606 - 22:42160013-42343616 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335626 TCF20-002 42161056-42215440 protein_coding
  ENST00000359486 TCF20-001 42160013-42215442 protein_coding
  ENST00000404876 TCF20-003 42161098-42210208 protein_coding
  ENST00000515426 TCF20-004 42214847-42343616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335626ENST00000359486ENST00000404876
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335626 N/A N/A 2.312±0.00 4.402±0.00 N/A 0.423±0.00 1.527±0.00 3.169±0.00 0.567±0.00 0.692±0.00 1.765±0.00 N/A 1.525±0.00
ENST00000359486 1.128±0.00 0.720±0.00 2.172±0.97 1.162±0.00 1.018±0.22 0.908±0.00 1.762±0.89 1.271±0.70 2.529±2.03 N/A 2.025±0.64 0.796±0.00 8.536±0.40
ENST00000404876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.298±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LO CIL_0004LO_0001 CGP 22:42126499-42343616
CIL_0004LN CIL_0004LN_0001 CGP 22:42160013-42432395

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 NAS DNA binding
GO:0003713 NAS transcription coactivator activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078348 tcf20 transcription factor 20 protein_coding Danio_rerio
ENSMUSG00000041852 Tcf20 transcription factor 20 protein_coding Mus_musculus
ENSMUSG00000071262 Zfp957 zinc finger protein 957 protein_coding Mus_musculus

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