C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004LO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100197-ENSG00000100207 CGP 9606 22:42126499-42343616
GeneTranscriptPositionBiotype
ENSG00000100197 (CYP2D6)
cytochrome P450, family 2, subfamily D, polypeptide 6 		ENST00000359033 (CYP2D6-002) 42126556-42130865 protein_coding
ENST00000360124 (CYP2D6-003) 42126499-42129909 nonsense_mediated_decay
ENST00000360608 (CYP2D6-001) 42126499-42130906 protein_coding
ENST00000389970 (CYP2D6-201) 42126501-42130881 protein_coding
ENST00000488442 (CYP2D6-004) 42126535-42130813 retained_intron
ENSG00000100207 (TCF20)
transcription factor 20 (AR1) 		ENST00000335626 (TCF20-002) 42161056-42215440 protein_coding
ENST00000359486 (TCF20-001) 42160013-42215442 protein_coding
ENST00000404876 (TCF20-003) 42161098-42210208 protein_coding
ENST00000515426 (TCF20-004) 42214847-42343616 protein_coding
ENSG00000182057 (OGFRP1)
opioid growth factor receptor pseudogene 1 		ENST00000332965 (OGFRP1-001) 42269753-42274862 lincRNA
ENST00000415205 (OGFRP1-002) 42269760-42275196 lincRNA
ENST00000446578 (OGFRP1-003) 42269768-42275033 lincRNA
ENSG00000205702 (CYP2D7P)
cytochrome P450, family 2, subfamily D, polypeptide 7 (gene/pseudogene) 		ENST00000358097 (CYP2D7P-002) 42140203-42144549 polymorphic_pseudogene
ENST00000424775 (CYP2D7P-006) 42142737-42143999 processed_transcript
ENST00000433992 (CYP2D7P-008) 42140203-42144577 polymorphic_pseudogene
ENST00000435101 (CYP2D7P-004) 42140203-42141924 nonsense_mediated_decay
ENST00000435688 (CYP2D7P-005) 42143284-42144549 retained_intron
ENST00000610593 (CYP2D7P-007) 42141242-42144549 retained_intron
ENST00000612115 (CYP2D7P-201) 42140205-42144577 protein_coding
ENST00000614967 (CYP2D7P-202) 42140205-42144554 protein_coding
ENSG00000226450 (CYP2D8P)
cytochrome P450, family 2, subfamily D, polypeptide 8, pseudogene 		ENST00000433633 (CYP2D8P-001) 42149886-42155001 unprocessed_pseudogene
ENSG00000233903 (Z83851.4)
 ENST00000420096 (Z83851.4-001) 42276355-42277052 lincRNA
ENSG00000273366 (CTA-989H11.1)
 ENST00000609564 (CTA-989H11.1-001) 42278188-42278846 lincRNA
CIL_0004LO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022445-ENSMUSG00000041852 CGP 10090 15:82790107-82912134
GeneTranscriptPositionBiotype
ENSMUSG00000022445 (Cyp2d26)
cytochrome P450, family 2, subfamily d, polypeptide 26 		ENSMUST00000006094 (Cyp2d26-201) 82790107-82794245 protein_coding
ENSMUSG00000041852 (Tcf20)
transcription factor 20 		ENSMUST00000048966 (Tcf20-201) 82808629-82912134 protein_coding
ENSMUST00000109510 (Tcf20-202) 82808629-82912134 protein_coding
ENSMUSG00000100199 (RP23-223M20.2)
predicted gene, 20324 		ENSMUST00000186291 (RP23-223M20.2-001) 82899080-82905818 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LO_0001ENSG00000100197ENST00000359033ENST00000360124ENST00000360608ENST00000389970ENST00000488442ENSG00000100207ENST00000335626ENST00000359486ENST00000404876ENST00000515426ENSG00000182057ENST00000332965ENST00000415205ENST00000446578ENSG00000205702ENST00000358097ENST00000424775ENST00000433992ENST00000435101ENST00000435688ENST00000610593ENST00000612115ENST00000614967ENSG00000226450ENST00000433633ENSG00000233903ENST00000420096ENSG00000273366ENST00000609564CIL_0004LO_0002ENSMUSG00000022445ENSMUST00000006094ENSMUSG00000041852ENSMUST00000048966ENSMUST00000109510ENSMUSG00000100199ENSMUST00000186291
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LO_0001ENSG00000100197ENST00000359033ENST00000360124ENST00000360608ENST00000389970ENST00000488442ENSG00000100207ENST00000335626ENST00000359486ENST00000404876ENSG00000182057ENST00000332965ENST00000415205ENST00000446578ENSG00000205702ENST00000358097ENST00000433992ENST00000435101ENST00000435688ENST00000610593ENST00000612115ENST00000614967ENSG00000226450ENST00000433633ENSG00000233903ENST00000420096ENSG00000273366ENST00000609564CIL_0004LO_0002ENSMUSG00000022445ENSMUST00000006094ENSMUSG00000041852ENSMUST00000048966ENSMUST00000109510ENSMUSG00000100199ENSMUST00000186291
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100197 ENST00000359033 N/A N/A N/A 0.261±0.00 N/A N/A 0.142±0.00 25.317±0.00 32.943±0.00 0.393±0.00 N/A N/A N/A 0.261±0.00
ENST00000360124 0.099±0.00 N/A N/A N/A N/A 0.199±0.00 N/A N/A 0.493±0.00 0.042±0.00 N/A 0.367±0.00 0.109±0.04 0.895±0.00
ENST00000360608 N/A N/A N/A N/A 0.456±0.00 N/A N/A 107.376±0.00 19.153±0.00 N/A N/A N/A N/A N/A
ENST00000389970 N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A
ENST00000488442 N/A N/A N/A 0.187±0.00 N/A 0.048±0.01 0.053±0.02 N/A N/A 0.068±0.00 0.579±0.00 0.045±0.00 0.031±0.00 N/A
ENSG00000100207 ENST00000335626 N/A N/A N/A 2.312±0.00 4.402±0.00 N/A 0.423±0.00 1.527±0.00 3.169±0.00 0.567±0.00 0.692±0.00 1.765±0.00 N/A 1.525±0.00
ENST00000359486 1.128±0.00 N/A 0.720±0.00 2.172±0.97 1.162±0.00 1.018±0.22 0.908±0.00 1.762±0.89 1.271±0.70 2.529±2.03 N/A 2.025±0.64 0.796±0.00 8.536±0.40
ENST00000404876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.298±0.00 N/A N/A
ENST00000515426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182057 ENST00000332965 0.144±0.00 0.308±0.00 N/A 0.051±0.03 N/A 0.090±0.00 N/A N/A N/A 0.195±0.00 N/A 0.072±0.00 0.152±0.07 0.479±0.36
ENST00000415205 N/A N/A N/A N/A 0.067±0.00 N/A 0.175±0.00 2.440±0.00 0.235±0.00 N/A N/A 0.161±0.00 0.331±0.17 0.342±0.00
ENST00000446578 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.546±0.08 N/A 0.067±0.00 N/A N/A
ENSG00000205702 ENST00000358097 N/A N/A N/A 0.202±0.00 0.223±0.00 N/A N/A N/A 7.702±0.00 N/A N/A N/A N/A 0.125±0.00
ENST00000424775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433992 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A 0.136±0.06
ENST00000435101 0.081±0.00 0.370±0.00 N/A 0.399±0.00 N/A 0.169±0.00 N/A 19.304±19.02 5.779±0.00 N/A N/A 0.391±0.23 0.112±0.02 0.149±0.00
ENST00000435688 N/A N/A N/A N/A N/A 0.562±0.00 0.030±0.00 N/A N/A 0.296±0.00 N/A N/A N/A N/A
ENST00000610593 N/A 0.443±0.00 N/A 0.253±0.00 0.098±0.00 N/A 0.063±0.00 0.367±0.00 2.347±2.21 0.374±0.00 N/A 0.992±0.00 0.096±0.02 0.215±0.00
ENST00000612115 0.098±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A 0.143±0.07
ENST00000614967 N/A N/A N/A 0.074±0.00 0.142±0.00 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A
ENSG00000226450 ENST00000433633 0.059±0.00 0.286±0.00 N/A 0.135±0.00 0.297±0.00 0.078±0.01 0.089±0.00 0.119±0.00 0.407±0.00 0.206±0.00 N/A 0.244±0.18 0.049±0.00 0.425±0.24
ENSG00000233903 ENST00000420096 0.483±0.00 0.928±0.00 N/A 1.307±0.00 0.331±0.00 N/A 0.217±0.00 0.273±0.00 2.088±0.00 0.437±0.12 N/A 0.221±0.07 0.358±0.25 0.263±0.00
ENSG00000273366 ENST00000609564 0.137±0.00 0.347±0.00 0.565±0.00 N/A 0.091±0.00 0.028±0.00 0.268±0.16 0.272±0.00 0.160±0.03 0.085±0.00 N/A 0.309±0.04 0.391±0.05 0.422±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022445 ENSMUST00000006094 0.131±0.06 0.361±0.29 0.059±0.04 0.053±0.00 1.516±1.24 18.705±6.32 0.162±0.10 327.846±25.77 581.036±412.22 0.320±0.13 0.068±0.06 0.348±0.25 0.376±0.34 11.377±5.16
ENSMUSG00000041852 ENSMUST00000048966 6.811±1.18 6.455±1.19 3.114±0.00 4.435±0.70 8.097±1.63 6.904±1.15 1.647±0.23 6.639±1.36 3.894±1.71 6.540±0.75 0.354±0.17 8.397±1.98 21.784±9.53 3.335±0.90
ENSMUST00000109510 N/A 1.099±0.00 N/A 11.491±3.17 N/A 1.097±0.18 1.085±0.32 0.966±0.00 N/A N/A 0.960±0.22 0.865±0.00 N/A 5.865±2.33
ENSMUSG00000100199 ENSMUST00000186291 0.315±0.18 0.248±0.06 0.149±0.00 0.205±0.06 3.225±1.44 0.784±0.26 0.190±0.05 0.897±0.41 0.591±0.12 1.229±0.11 0.099±0.05 0.555±0.32 0.685±0.51 2.317±1.07

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