C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 20 (AR1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359486 TCF20-001 ENSG00000100207 9606 - 22:42160013-42215442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000359486
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000359486 1.128±0.00 0.720±0.00 2.172±0.97 1.162±0.00 1.018±0.22 0.908±0.00 1.762±0.89 1.271±0.70 2.529±2.03 2.025±0.64 0.796±0.00 8.536±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LO CIL_0004LO_0001 CGP 22:42126499-42343616
CIL_0004LN CIL_0004LN_0001 CGP 22:42160013-42432395

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 NAS DNA binding
GO:0003713 NAS transcription coactivator activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109510 Tcf20-202 protein_coding Mus_musculus 0 6898
ENSMUST00000048966 Tcf20-201 protein_coding Mus_musculus 0 6035
ENSMUST00000040802 Zfp957-201 protein_coding Mus_musculus 0 959
ENSMUST00000161649 Zfp957-001 protein_coding Mus_musculus 0 959

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