C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004LN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100207-ENSG00000235568 CGP 9606 22:42160013-42432395
GeneTranscriptPositionBiotype
ENSG00000100207 (TCF20)
transcription factor 20 (AR1) 		ENST00000335626 (TCF20-002) 42161056-42215440 protein_coding
ENST00000359486 (TCF20-001) 42160013-42215442 protein_coding
ENST00000404876 (TCF20-003) 42161098-42210208 protein_coding
ENST00000515426 (TCF20-004) 42214847-42343616 protein_coding
ENSG00000182057 (OGFRP1)
opioid growth factor receptor pseudogene 1 		ENST00000332965 (OGFRP1-001) 42269753-42274862 lincRNA
ENST00000415205 (OGFRP1-002) 42269760-42275196 lincRNA
ENST00000446578 (OGFRP1-003) 42269768-42275033 lincRNA
ENSG00000229891 (LINC01315)
long intergenic non-protein coding RNA 1315 		ENST00000412060 (LINC01315-002) 42364402-42369208 lincRNA
ENST00000424852 (LINC01315-001) 42364525-42369236 lincRNA
ENST00000432473 (LINC01315-003) 42364400-42369168 lincRNA
ENSG00000233903 (Z83851.4)
 ENST00000420096 (Z83851.4-001) 42276355-42277052 lincRNA
ENSG00000235568 (NFAM1)
NFAT activating protein with ITAM motif 1 		ENST00000329021 (NFAM1-001) 42380410-42432395 protein_coding
ENST00000355469 (NFAM1-002) 42410277-42432362 nonsense_mediated_decay
ENSG00000273366 (CTA-989H11.1)
 ENST00000609564 (CTA-989H11.1-001) 42278188-42278846 lincRNA
CIL_0004LN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041852-ENSMUSG00000058099 CGP 10090 15:82808629-83033306
GeneTranscriptPositionBiotype
ENSMUSG00000041852 (Tcf20)
transcription factor 20 		ENSMUST00000048966 (Tcf20-201) 82808629-82912134 protein_coding
ENSMUST00000109510 (Tcf20-202) 82808629-82912134 protein_coding
ENSMUSG00000058099 (Nfam1)
Nfat activating molecule with ITAM motif 1 		ENSMUST00000023076 (Nfam1-003) 82997726-83029950 protein_coding
ENSMUST00000100377 (Nfam1-002) 82997726-83033306 protein_coding
ENSMUST00000109503 (Nfam1-001) 82997721-83023138 protein_coding
ENSMUSG00000097301 (AW121686)
expressed sequence AW121686 		ENSMUST00000181049 (AW121686-201) 82982870-82989134 lincRNA
ENSMUSG00000100199 (RP23-223M20.2)
predicted gene, 20324 		ENSMUST00000186291 (RP23-223M20.2-001) 82899080-82905818 antisense
ENSMUSG00000100552 (RP23-223M20.1)
predicted gene 29019 		ENSMUST00000186748 (RP23-223M20.1-002) 82982784-82987712 lincRNA
ENSMUST00000188623 (RP23-223M20.1-001) 82982725-82987830 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LN_0001ENSG00000100207ENST00000335626ENST00000359486ENST00000404876ENST00000515426ENSG00000182057ENST00000332965ENST00000415205ENST00000446578ENSG00000229891ENST00000412060ENST00000424852ENST00000432473ENSG00000233903ENST00000420096ENSG00000235568ENST00000329021ENST00000355469ENSG00000273366ENST00000609564CIL_0004LN_0002ENSMUSG00000041852ENSMUST00000048966ENSMUST00000109510ENSMUSG00000058099ENSMUST00000023076ENSMUST00000100377ENSMUST00000109503ENSMUSG00000097301ENSMUST00000181049ENSMUSG00000100199ENSMUST00000186291ENSMUSG00000100552ENSMUST00000186748ENSMUST00000188623
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LN_0001ENSG00000100207ENST00000335626ENST00000359486ENST00000404876ENSG00000182057ENST00000332965ENST00000415205ENST00000446578ENSG00000229891ENST00000412060ENST00000424852ENST00000432473ENSG00000233903ENST00000420096ENSG00000235568ENST00000329021ENST00000355469ENSG00000273366ENST00000609564CIL_0004LN_0002ENSMUSG00000041852ENSMUST00000048966ENSMUST00000109510ENSMUSG00000058099ENSMUST00000023076ENSMUST00000100377ENSMUST00000109503ENSMUSG00000097301ENSMUST00000181049ENSMUSG00000100199ENSMUST00000186291ENSMUSG00000100552ENSMUST00000186748
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100207 ENST00000335626 N/A N/A N/A 2.312±0.00 4.402±0.00 N/A 0.423±0.00 1.527±0.00 3.169±0.00 0.567±0.00 0.692±0.00 1.765±0.00 N/A 1.525±0.00
ENST00000359486 1.128±0.00 N/A 0.720±0.00 2.172±0.97 1.162±0.00 1.018±0.22 0.908±0.00 1.762±0.89 1.271±0.70 2.529±2.03 N/A 2.025±0.64 0.796±0.00 8.536±0.40
ENST00000404876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.298±0.00 N/A N/A
ENST00000515426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182057 ENST00000332965 0.144±0.00 0.308±0.00 N/A 0.051±0.03 N/A 0.090±0.00 N/A N/A N/A 0.195±0.00 N/A 0.072±0.00 0.152±0.07 0.479±0.36
ENST00000415205 N/A N/A N/A N/A 0.067±0.00 N/A 0.175±0.00 2.440±0.00 0.235±0.00 N/A N/A 0.161±0.00 0.331±0.17 0.342±0.00
ENST00000446578 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.546±0.08 N/A 0.067±0.00 N/A N/A
ENSG00000229891 ENST00000412060 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A 1.112±0.00 N/A 0.457±0.00 N/A 0.106±0.03 N/A
ENST00000424852 0.040±0.00 0.734±0.00 N/A 0.855±0.51 0.470±0.00 0.785±0.68 0.034±0.00 0.357±0.00 0.019±0.00 1.936±0.00 0.278±0.00 0.632±0.31 0.070±0.00 0.324±0.15
ENST00000432473 0.058±0.00 0.584±0.00 N/A 1.414±0.47 1.436±0.00 0.401±0.13 0.236±0.00 0.810±0.00 N/A 0.250±0.00 N/A 2.236±1.94 N/A 1.111±0.48
ENSG00000233903 ENST00000420096 0.483±0.00 0.928±0.00 N/A 1.307±0.00 0.331±0.00 N/A 0.217±0.00 0.273±0.00 2.088±0.00 0.437±0.12 N/A 0.221±0.07 0.358±0.25 0.263±0.00
ENSG00000235568 ENST00000329021 4.325±0.00 5.388±0.00 N/A 0.280±0.24 0.969±0.62 0.391±0.33 0.413±0.24 0.840±0.30 0.999±0.75 1.667±1.09 0.114±0.00 0.705±0.52 1.988±0.40 0.575±0.30
ENST00000355469 N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A
ENSG00000273366 ENST00000609564 0.137±0.00 0.347±0.00 0.565±0.00 N/A 0.091±0.00 0.028±0.00 0.268±0.16 0.272±0.00 0.160±0.03 0.085±0.00 N/A 0.309±0.04 0.391±0.05 0.422±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041852 ENSMUST00000048966 6.811±1.18 6.455±1.19 3.114±0.00 4.435±0.70 8.097±1.63 6.904±1.15 1.647±0.23 6.639±1.36 3.894±1.71 6.540±0.75 0.354±0.17 8.397±1.98 21.784±9.53 3.335±0.90
ENSMUST00000109510 N/A 1.099±0.00 N/A 11.491±3.17 N/A 1.097±0.18 1.085±0.32 0.966±0.00 N/A N/A 0.960±0.22 0.865±0.00 N/A 5.865±2.33
ENSMUSG00000058099 ENSMUST00000023076 N/A N/A N/A 0.237±0.04 4.246±0.00 N/A N/A N/A N/A N/A 0.211±0.04 0.577±0.00 N/A N/A
ENSMUST00000100377 5.873±0.94 2.644±0.14 1.626±0.21 0.316±0.12 10.691±2.23 1.887±0.39 1.507±0.47 1.318±0.15 2.841±1.64 10.532±1.67 0.291±0.27 2.729±1.01 0.715±0.37 0.414±0.17
ENSMUST00000109503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 0.371±0.00 0.133±0.00 0.188±0.02
ENSMUSG00000097301 ENSMUST00000181049 0.020±0.01 0.042±0.02 0.011±0.00 0.677±0.06 0.032±0.00 0.041±0.01 0.012±0.00 0.025±0.01 0.008±0.00 0.017±0.00 N/A 0.072±0.00 0.228±0.07 0.120±0.06
ENSMUSG00000100199 ENSMUST00000186291 0.315±0.18 0.248±0.06 0.149±0.00 0.205±0.06 3.225±1.44 0.784±0.26 0.190±0.05 0.897±0.41 0.591±0.12 1.229±0.11 0.099±0.05 0.555±0.32 0.685±0.51 2.317±1.07
ENSMUSG00000100552 ENSMUST00000186748 N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A 0.295±0.26 N/A N/A 0.263±0.00 1.146±0.29 0.727±0.18
ENSMUST00000188623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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