C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041852 Tcf20 10090 - 15:82808629-82912134 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048966 Tcf20-201 82808629-82912134 protein_coding
  ENSMUST00000109510 Tcf20-202 82808629-82912134 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048966ENSMUST00000109510
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048966 6.811±1.18 6.455±1.19 3.114±0.00 4.435±0.70 8.097±1.63 6.904±1.15 1.647±0.23 6.639±1.36 3.894±1.71 6.540±0.75 0.354±0.17 8.397±1.98 21.784±9.53 3.335±0.90
ENSMUST00000109510 N/A 1.099±0.00 N/A 11.491±3.17 N/A 1.097±0.18 1.085±0.32 0.966±0.00 N/A N/A 0.960±0.22 0.865±0.00 N/A 5.865±2.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LO CIL_0004LO_0002 CGP 15:82790107-82912134
CIL_0004LN CIL_0004LN_0002 CGP 15:82808629-83033306

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078348 tcf20 transcription factor 20 protein_coding Danio_rerio
ENSG00000100207 TCF20 transcription factor 20 (AR1) protein_coding Homo_sapiens

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